LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1154g00102	ATGTTTTTGAAGCTTTTTATGGCTTTGGTGCTTTTGTTGGTAACAACAATGGTACAAGTGAGTGGTGCAGATACAAGTTTCATCTTTAATTATGGCTTCCCATCTGCTAATTTAACCATGGATGGTATCTCTATCATCACTCCCAATGGCCTTCTCCAACTCACCAATGAAACTAGGACGCAAACGGGTCATGCTTTTTACTCCAATCCAGTAGTTTTCACAAACACTTCTTCTTTCTCTACTACTTTTGTTTTCGCCATTAGACCTCAGTATCCAACTCTGGGTGGTCCTGGGATGGCTTTTGTGATCTCTCCAAAAAATGCTTTTCCATATGCTCTCCCCAACCAGTACCTCGGCCTCTTCAACGGAACCAACAATGGCGACCCCAAAAACCACGTGCTCGCTGTAGAATTCGACACCGTCCAGAACATTGTGTTCGGGGATATCAATGATAACCATGTTGGGATCAATATCAACGGTTTGAATTCCACAAAAGCTGCTCCTGCTGGATATAAAGTAAATAGGTTTCAATCTCAAAATTTGAGCCTCAAGAGTGGCTTGCCGATGCAGGTGTGGGTGGACTACGATGGAGGCAAGAGGCAAATAAGTGTCACCCTAGCTCCAATCAATGTTAACAAGCCCGAAACACCATTGTTAACATTGTCCCGAGATCTTTCTCAGGTTCTAACCAATCCTAGTTATGTCGGATTCTCATCTTCTAACAGCGTGCTGACAGCTTTTCATTATGTTCTTGGTTGGAGTTTCCAGGTCAATGGCGAGGCTCAAAAGCTTGACACCTCCAGACTCCCAAAACTCCCACGACTTGGAGGGAACAAACAATCAATGATTTTGCCGATTGGGATACCCCTCCTTTCACTCTGTTTGATTCTTCTTGTTTGCTTATCCGTAGTTTATTACATATACAGGAAAAGGAAATTTTCTGAGGTTGTCGAGGAGTGGGAACAAGACTATGGTCCTCACAGGTTCAAATACAAAGATCTCTATGTTGCCACAAAGGGATTCAGAGAGAAAGAGCTTCTTGGCAGTGGTGGTTTTGGCAGCGTCTACAAAGGGACTATGCCAGGTTCAAAAATTGAGGTTGCCGTGAAGAAAATATCCCATGAATCCCGACAAGGGATGAGGGAATTTATAGCAGAAATCTTGAGCATCGGTCGTCTACGCCATCGAAACCTCGTGTCTCTTTTGGGATATTGTAGGCGAAAAGGTGAGCTTCTTTTGGTTTATGATTTCATGCCGAATGGAAGCTTAGATAAATACCTTCACAACCAACCCAGAGTGATGCTAAATTGGATGCAAAGATTCAGAATCATCAAAGGCGTAGCTTCAGGACTGTGTTATCTGCATGAAGAGTGGGAGCAAGTTGTGGTTCACAGAGACATAAAAGCAAGCAATGTATTGCTAGATTCTGAGTTTAATGGAAGGTTAGGAGATTTTGGTCTGGCAAGGTTATACGATCATGGGAGTGATCCTGCAACTACGCATGTTGTCGGGACCTTGGGATATCTAGCACCGGAGAACACAAGAACAGGGAAAGCCACAACAAGGTCTGATGTTTTTGCTTTTGGAGCTTTTTTGCTGGAGGTTGCATGTGGAAAAAGGCCCATAGAGCGAAGAAGAGAAGAGTATATTTTGGTGGATTGGGTTTATGTGTTATGGAAGAGGGGTGAGATTAATGAGGCAAAGGATCCAAATTTAGGAACAGATTACAAAGCAGAGGAGGTAGAATTGGTGTTGAAATTGGGGCTTATGTGTTCGAATTGTAAGGCTGGAGACAGGCCAAGCATGCGGCAAGTTGTGCAGTATTTGAATTTGGAGATGGCTTTGCCTGATTTGCCATTGCCATTGCCGTCTCCTTCTTGCTGTGGATTCACAGGTACGAGTGACCAAGACTTAAATGACATTCAAATGTCCATTACAACTTCAAGTATGGGTGGCTATTTCTCTCGCACCTCAATACCCGAATCAATCCTTTCTGGAGGTCGGTGA	2007	0.436	MFLKLFMALVLLLVTTMVQVSGADTSFIFNYGFPSANLTMDGISIITPNGLLQLTNETRTQTGHAFYSNPVVFTNTSSFSTTFVFAIRPQYPTLGGPGMAFVISPKNAFPYALPNQYLGLFNGTNNGDPKNHVLAVEFDTVQNIVFGDINDNHVGININGLNSTKAAPAGYKVNRFQSQNLSLKSGLPMQVWVDYDGGKRQISVTLAPINVNKPETPLLTLSRDLSQVLTNPSYVGFSSSNSVLTAFHYVLGWSFQVNGEAQKLDTSRLPKLPRLGGNKQSMILPIGIPLLSLCLILLVCLSVVYYIYRKRKFSEVVEEWEQDYGPHRFKYKDLYVATKGFREKELLGSGGFGSVYKGTMPGSKIEVAVKKISHESRQGMREFIAEILSIGRLRHRNLVSLLGYCRRKGELLLVYDFMPNGSLDKYLHNQPRVMLNWMQRFRIIKGVASGLCYLHEEWEQVVVHRDIKASNVLLDSEFNGRLGDFGLARLYDHGSDPATTHVVGTLGYLAPENTRTGKATTRSDVFAFGAFLLEVACGKRPIERRREEYILVDWVYVLWKRGEINEAKDPNLGTDYKAEEVELVLKLGLMCSNCKAGDRPSMRQVVQYLNLEMALPDLPLPLPSPSCCGFTGTSDQDLNDIQMSITTSSMGGYFSRTSIPESILSGGR	668

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1154g00102	668	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	462	474	IPR008271	GO:0004672\|GO:0006468
	Pral1154g00102	668	PANTHER	-	18	613	-	-
	Pral1154g00102	668	Gene3D	-	23	272	-	-
	Pral1154g00102	668	FunFam	L-type lectin-domain containing receptor kinase V.9	24	262	-	-
	Pral1154g00102	668	Pfam	Protein kinase domain	341	607	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1154g00102	668	SUPERFAMILY	Protein kinase-like (PK-like)	322	631	IPR011009	-
	Pral1154g00102	668	SUPERFAMILY	Concanavalin A-like lectins/glucanases	25	275	IPR013320	-
	Pral1154g00102	668	SMART	serkin_6	341	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1154g00102	668	FunFam	L-type lectin-domain containing receptor kinase S.4	418	621	-	-
	Pral1154g00102	668	Gene3D	Phosphorylase Kinase; domain 1	326	417	-	-
	Pral1154g00102	668	FunFam	Lectin-domain containing receptor kinase A4.3	326	417	-	-
	Pral1154g00102	668	ProSitePatterns	Legume lectins beta-chain signature.	134	140	IPR019825	-
	Pral1154g00102	668	ProSitePatterns	Protein kinases ATP-binding region signature.	347	371	IPR017441	GO:0005524
	Pral1154g00102	668	ProSiteProfiles	Protein kinase domain profile.	341	611	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1154g00102	668	Pfam	Legume lectin domain	25	270	IPR001220	GO:0030246
	Pral1154g00102	668	Gene3D	Transferase(Phosphotransferase) domain 1	418	614	-	-
	Pral1154g00102	668	CDD	STKc_IRAK	347	610	-	-
	Pral1154g00102	668	CDD	lectin_legume_LecRK_Arcelin_ConA	25	259	IPR001220	GO:0030246

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1154g00102	Pral-Chr1154	666025	668823	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1154g00102	19	668	Receptor kinase-like Gene Family	AT2G37710	59.242	0.0	776

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral1154g00102		Pkinase	2.6e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1154g00102	-		-	jre:108979938	830.476