Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00100 ATGTCTGTGAAGCTCTTGGCTATGGTGTTTTTGCTGGTGGCAGCGAGTGGTGAAGATACAAGTTTCATCTTCAATTACGGGTTCCAATCTGCTAATCTAACCACGGATGGTATCTCTTTCATCACTTCCAATGGCCTCCTCCAACTCACTAACGAAACCAGGTTGCAAAAGAGTCATGCCTTTTACCCCAATCCAGTAGATTTCACAAACACCACTTCTTTCTCTACCGTTTTTGTTTTCGCCATCAAACCACAATATCCAACTCTGAATGGCCATGGAATTGCTTTTGTCATTTCTCCCACAAAAGCATTTCCAGATGCGCAGCCCAGCCAGTACTTCGGCCTCTTCAACTTAGCCAACAATGGAGACCCCAGAAACCATGTCCTTGCCATAGAACTCGACACCATCGAGAGCGGTGAGTTTGGGGATATCAATGATAACCATGTCGGGATTGATATTAACGGTTTGAATTCCACAAAATCTGCTCCTGCCGGATATTATGTGAGTAGGTTTCAGTTTCAAAATTTGAGCCTCAACAGTAGCCTGCCAATGCAGGTGTGGGTGGACTACGATGGAGGCAAGAAGCAAATTAGTGTCACCCTAGCTCCAATCAACGTTAACAAGCCCGAAATTCCACTGTTAACATTGTCCCGAGATCTTTCTCAAATTCTAACCAATCCCAGTTATGTCGGATTCTCATCTTCCAACGGAGCGCTGACAGCTTTTCAATATGTTCTTGGTTGGAGTTTCCAGGTCAATGGGGAGGCTCAAAAACTTGATACCACTAAACTCCCAAAACTACCACGATTTGGAGGAAACAAACAATCTATGATTTTGCCAATTGGGTTACCTCTCCTTTCACTTTTTCTAATTGTTCTTGTTAGTCTTTCTATAGCTTATTACATATACAGGAAAAGGAAATTTTCTGAGGTTGTCGAGGAGTGGGAGCAAGACTATGGTCCTCACAGGTTCAACTACAAAGATCTCTACAGTGCCACAAAGGGATTCAGAGAGAAAGAGCTTCTCGGCAGTGGTGGCTTTGGTAGCGTCTACAAAGGAACAGTTCCAGGTTCGAAAGTTGAGGTTGCCGTGAAGAAAGTATCCCATGAATCCCGACAAGGGATGAGGGAATTCATAGCAGAAATCGTGAGCATCGGTCGTCTACGCCATCGAAACCTCGTCTCTCTTTTGGGATATTGCAGGCGCAAAGGAGAGCTTCTTTTGGTTTATGATTTCATGCCGAATGGAAGCTTAGATAAATATATCCACAACCAGCCCAGTGTGACACTAAATTGGATGCAAAGATTTAAGATCATCAAAGGGGTAGCTTTGGGATTGTGCTATCTGCATGAAGAATGGGAGCAAGTTGTAGTTCACAGAGACATCAAAGCAAGCAATGTTTTGCTAGATTCAGAGTTTAATGGCAGACTAGGAGATTTCGGTCTTGCAAGATTATATGATCACGGGAGTGATCCTGCAACTACACATGTGGTCGGGACCTTAGGATATCTAGCACCAGAGAACACAATAACGGGAAAAGCCACAACAAAGTCTGATGTTTTTGCTTTTGGCGCTTTTTTGATAGAGGTTGTATGTGGAAAAAGACCTATAGAACGAGGAAGAGAAGAATTTATTTTGGTGAACTGGGTTTACGGGTTATGGAAGAAGGGTGAGATTAACGAAGCAAAGGATCCAAATTTAGGAACAGAGTACAAAGCAGAGGAGGGAGAATTAGTGTTGAAACTGGGGCTTATGTGTTCCAATTTGAGATCTGAATATAGGCCAAGCATGCGCCAAGTTGTGCAGTACTTGAATATGGAAGTGCCTTTACCTGACTTGCCACTGCCACTGCCACTGCCGTCTCCTTCTGGCCGTGGATTTACATATGGGAGTCAGCAAGACTTTGATGACATTCAAATGTCCTTTGCGTCTTCAAGTATGGATGGCTATTTCTCTCGCACTTCAATACCTGAATCAATCCTCTCTGGAGGTCGTTGA 1998 0.4369 MSVKLLAMVFLLVAASGEDTSFIFNYGFQSANLTTDGISFITSNGLLQLTNETRLQKSHAFYPNPVDFTNTTSFSTVFVFAIKPQYPTLNGHGIAFVISPTKAFPDAQPSQYFGLFNLANNGDPRNHVLAIELDTIESGEFGDINDNHVGIDINGLNSTKSAPAGYYVSRFQFQNLSLNSSLPMQVWVDYDGGKKQISVTLAPINVNKPEIPLLTLSRDLSQILTNPSYVGFSSSNGALTAFQYVLGWSFQVNGEAQKLDTTKLPKLPRFGGNKQSMILPIGLPLLSLFLIVLVSLSIAYYIYRKRKFSEVVEEWEQDYGPHRFNYKDLYSATKGFREKELLGSGGFGSVYKGTVPGSKVEVAVKKVSHESRQGMREFIAEIVSIGRLRHRNLVSLLGYCRRKGELLLVYDFMPNGSLDKYIHNQPSVTLNWMQRFKIIKGVALGLCYLHEEWEQVVVHRDIKASNVLLDSEFNGRLGDFGLARLYDHGSDPATTHVVGTLGYLAPENTITGKATTKSDVFAFGAFLIEVVCGKRPIERGREEFILVNWVYGLWKKGEINEAKDPNLGTEYKAEEGELVLKLGLMCSNLRSEYRPSMRQVVQYLNMEVPLPDLPLPLPLPSPSGRGFTYGSQQDFDDIQMSFASSSMDGYFSRTSIPESILSGGR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00100 665 SMART serkin_6 336 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00100 665 FunFam L-type lectin-domain containing receptor kinase S.4 413 616 - -
Pral1154g00100 665 PANTHER - 20 614 - -
Pral1154g00100 665 CDD STKc_IRAK 342 605 - -
Pral1154g00100 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Pral1154g00100 665 Gene3D - 18 268 - -
Pral1154g00100 665 Gene3D Phosphorylase Kinase; domain 1 321 412 - -
Pral1154g00100 665 CDD lectin_legume_LecRK_Arcelin_ConA 20 254 IPR001220 GO:0030246
Pral1154g00100 665 FunFam L-type lectin-domain containing receptor kinase V.9 19 257 - -
Pral1154g00100 665 SUPERFAMILY Protein kinase-like (PK-like) 317 623 IPR011009 -
Pral1154g00100 665 Pfam Protein kinase domain 336 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00100 665 FunFam Lectin-domain containing receptor kinase A4.3 321 412 - -
Pral1154g00100 665 Gene3D Transferase(Phosphotransferase) domain 1 413 608 - -
Pral1154g00100 665 ProSiteProfiles Protein kinase domain profile. 336 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00100 665 Pfam Legume lectin domain 20 265 IPR001220 GO:0030246
Pral1154g00100 665 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 270 IPR013320 -
Pral1154g00100 665 ProSitePatterns Protein kinases ATP-binding region signature. 342 366 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00100 Pral-Chr1154 654075 657448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00100 15 665 Receptor kinase-like Gene Family AT2G37710 60.152 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1154g00100 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00100 - - tcc:18597713 844.728