Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00097 ATGTGTGTTTCGAAGCTTATTATGGAGTCGGTGCTTTTGTTGGTGACAACAATGGTACATATATATATGAGTGGTGCAGATACAAGTTTCATCTTTAATAATGGCTTCCAGTCAGCTAATTTAACCATGGATGGTGTTTCTGAGATCACTCCCAATGGCCTCCTCCGGCTTACCAATGAAACCGTCCTACAAAAAGGTCATGCTTTCTACCCAAACCCAATAGTTTTCACAAACACGTCTTCTTTCTCTACCACTTTTGTTTTCGCCATTAGACCTATTCCTCCAACTTCGGGTGGTCATGGAATGGCCTTTGTAATATCTCCAACCAAAGCATTTCCTGGTGCTCTTGCCACTCAGTACCTAGGCCTTTTCCATGACACCAACAACGGTGACCCAACAAACCATGTGTTCGCAGTGGAAATCGACATCGTTCAGACCATTGAGTTTGGGGATATCGATAATAACCATGTGGGAATCGATATTAATGGCCTGAAATCAATGAAATCTGCTCCTGCTGGGTATGATAATGGGTTTCAGTTCCATAATTTGAGCCTTATTAGTGGCCTGCCGATGCAAGTGTGGGTGGACTATGATGGAGGCAAGAAACAAATCAATGTCACCCTAGCTCCAATCAATGTTATCAAGCCCGAAACTCCACTGTTAACATTGTCCAAAGATCTTTCTCAAATTCTAACCAATCCCAGTTATGTCGGATTTTCATCTTCCGATGGGCAGCTGATGGCTTTTCATTATGTTCTTGGTTGGAGTTTCCAGCTCAATGGGGAGGCTCAAAACCTAGACGCCTCAAAACTCCCAAAACTGCCACCAGTTGATGGCAAACGATCTTTGATCTTATTAATTGGGTTACCGCTCCTTTTATTCAGTTTAATTGTTTTTGTGAGTGTATTTGTAGTTTGGTACATAAAGACGAAAAGAAAATTTTCCGAGATTGTTGAGGAGTGGGAGCAAAATTATGGTCCTCACAGGTTTAAGTACAAAGATCTCTACTTTGCCACGAAAGGATTCAAAGAGGAAGAGCTTTTGGGCTGTGGTGGATTTGGAAAGGTGTACAAAGGGACGATGCCGGGTTCGAAAATTGATGTTGCGGTGAAGAAAGTGTCACATGATTCCCAGCAAGGCATGAGGGAATTCATTGCAGAAATTGTAAGCATTGGTCGTCTTCGGCACAAAAACCTTGTTTCTCTTCTAGGATATTGCAGGCGAAAACGGGAGCTTCTTTTAGTCTACGAGTTTATGCCAAATGGAAGCTTAGACAAATACCTGTATAATCAACCCACTGTGACACTAAATTGGATGCAAAGATTTAAAATCATCAAAGGGGTAGCTTTGGGATTGTGCTATCTGCATGAAGAATGGGAGCAAGTTGTCATTCACAGAGACGTGAAAGCAAGCAATGTTCTGTTAGATTTAGAGTTAAATGGCAGGTTAGGAGATTTTGGTCTTGCTAGATTATACGATCATGGGGCTGATCCGACAACTACACATGTGGCCGGCACTGTAGGATATCTTGCACCAGAAAGCATACGAACAGGAAGAGCCACGACAAAATGTGATGTTTTTGCTTTCGGTGCCTTATCACTTGAGGTTGTATGCGGAAGAAGACCTATAGAGCGAGGAAGTGAAGATGAGATTTTGGTGGATTGGGTTTATGAGTTATGGAAGAAGGGTCAAATTATTGGGGCATTGGATCAAGCTTTAGGAAGGGAATATAACGAAGAGGATGTAGAATTAGTGTTGAGATTAGGACTTTTGTGTTCAGGTTCTAAAGCTGAAGGTAGGCCAAACATGCGTCAAGTTGTGCAATATTTGAATAGGGAAGTTCCTTTGCCAGATTTGTTATCACAAATGTCATCTCCCTCTTGTTTTGGATTCACATTTGAGAGTGATCAAGGGTTTGATGCTATAGTGTCCTTTCCATCTTCCATTGTGGGTGGCACTCACACTTCAATATCTGAATCACTTCTCTCCGGAGGTCGCTGA 2001 0.4213 MCVSKLIMESVLLLVTTMVHIYMSGADTSFIFNNGFQSANLTMDGVSEITPNGLLRLTNETVLQKGHAFYPNPIVFTNTSSFSTTFVFAIRPIPPTSGGHGMAFVISPTKAFPGALATQYLGLFHDTNNGDPTNHVFAVEIDIVQTIEFGDIDNNHVGIDINGLKSMKSAPAGYDNGFQFHNLSLISGLPMQVWVDYDGGKKQINVTLAPINVIKPETPLLTLSKDLSQILTNPSYVGFSSSDGQLMAFHYVLGWSFQLNGEAQNLDASKLPKLPPVDGKRSLILLIGLPLLLFSLIVFVSVFVVWYIKTKRKFSEIVEEWEQNYGPHRFKYKDLYFATKGFKEEELLGCGGFGKVYKGTMPGSKIDVAVKKVSHDSQQGMREFIAEIVSIGRLRHKNLVSLLGYCRRKRELLLVYEFMPNGSLDKYLYNQPTVTLNWMQRFKIIKGVALGLCYLHEEWEQVVIHRDVKASNVLLDLELNGRLGDFGLARLYDHGADPTTTHVAGTVGYLAPESIRTGRATTKCDVFAFGALSLEVVCGRRPIERGSEDEILVDWVYELWKKGQIIGALDQALGREYNEEDVELVLRLGLLCSGSKAEGRPNMRQVVQYLNREVPLPDLLSQMSSPSCFGFTFESDQGFDAIVSFPSSIVGGTHTSISESLLSGGR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00097 666 SMART serkin_6 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00097 666 Gene3D Transferase(Phosphotransferase) domain 1 419 615 - -
Pral1154g00097 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pral1154g00097 666 CDD lectin_legume_LecRK_Arcelin_ConA 28 261 IPR001220 GO:0030246
Pral1154g00097 666 SUPERFAMILY Protein kinase-like (PK-like) 323 622 IPR011009 -
Pral1154g00097 666 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Pral1154g00097 666 Gene3D - 26 274 - -
Pral1154g00097 666 Pfam Protein tyrosine and serine/threonine kinase 344 610 IPR001245 GO:0004672|GO:0006468
Pral1154g00097 666 FunFam L-type lectin-domain containing receptor kinase S.4 419 623 - -
Pral1154g00097 666 FunFam L-type lectin-domain containing receptor kinase V.9 27 264 - -
Pral1154g00097 666 ProSitePatterns Protein kinases ATP-binding region signature. 348 372 IPR017441 GO:0005524
Pral1154g00097 666 ProSiteProfiles Protein kinase domain profile. 342 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00097 666 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Pral1154g00097 666 Pfam Legume lectin domain 28 272 IPR001220 GO:0030246
Pral1154g00097 666 PANTHER - 36 615 - -
Pral1154g00097 666 CDD STKc_IRAK 348 612 - -
Pral1154g00097 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 277 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00097 Pral-Chr1154 622744 625152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00097 24 666 Receptor kinase-like Gene Family AT2G37710 58.699 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1154g00097 PK_Tyr_Ser-Thr 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00097 - - jre:108979938 823.157