Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00096 ATGTGTGTTTCGAAGCTTACTATGATGTTGGTGCTGTTATTGGTGACAAAACTAGTACAAATCACTTCCAATGGCCTCCTCCAGCTCACAAACGAAACCGTGCAACAAACAGGTCATGCCTTCCACACAAATCCAATAGTTCTCACAAACACGTCTTCTTTCTCTACCACTTTTGTTTTCGCCATTAGACCTGTAACTTCTCCAGCATCGGGTCATGGAATGGCTTTCGTAATTTCTCCAACCAAAGCATTTCCCAGTGCAACTGCCGGTCCGTACCTAGGCCTCTTCAACATAACCAACAACGCTGACCCAACGAACCATGTGTTTGCAGTGGAACTCGACATCATTCAGAGCAGTGAGTTCGATGATATTGACGGGAACCATGTGGGAATCGATATCAATGGCTTGAAATCAATGGAATATGCTTCTGCTGGATATTATGTTAATGGGTTTCAGTTTCGTAATTTGAGCCTTAAGAGTGGCCTGCCGATGCAAGTGTGGGTGGATTATGACGGAGGTGAGACACAAATCAATGTCACTCTAGCTCCAATCAATGCCAACAAGCCAGAAACACCATTGTTAACGTTGCACCAAGATCTTTCTCAAGTTTTAACTAATTCCAGTTATGTTGGATTCTCATCTTCCACCTCTGCAACGCTGATAGCTTCTCATTATGTTCTTGGGTGGAGTTTCCAGCTCAATGGGAAGGCTCAAAATCTCGACGCCTCAAAACTCCCAAAACTACCGCCACTTAAAAGGAAAAGATCTATGATTTTACTAATTGTGTTACCTCTCCTCTCACTCTGTTTAATTATTTTTGTGAGTTTACTTGTAGTTTGTTACATAAAGAAGAAAAGAAAATTCTCCGAGATTGTTGAGGATTGGGAGCAAAATTATGGTCCTCACAGGTTTAAATATAAAGATCTCTACTTTGCCACAAAAGGATTCAAAGAGAAAGAGCTTTTGGGCTCTGGTGGATTTGGAAAGGTGTACAAAGGGACGATGCCGGGTTCTAAAATTGAGGTTGCTGTGAAGAAAGTATCACATGATTCCCAGCAAGGCATGAGGGAATTCATTGCAGAAATTGTAAGCATCGGTCATCTTCGCCACCGAAACCTTGTTTCTCTTCTGGGATATTGCAGGCGAAAAGGCGAGCTTCTTTTAGTCTACGAGTTTATGCCAAATGGAAGCTTAGATAAATACCTCCATAACCAACCGAGTATAACACTAAATTGGATGCAAAGATTTAAAATCATCAAAGGGGTAGCTTTGGGATTGTGCTATCTGCATGAAGAATGGGAGCAAGTTGTGATTCATAGAGACATAAAAGCAAGCAATGTTATGTTAGATTCTAATTTCAATGGAAGGTTAGGAGATTTTGGTCTTGCTAGATTATATGATCATGAGGTTGATCCTGCAACTACACATGTGGCCGGGACTCTGGGATATGTTGCACCAGAAACAATGAGAACAGGAAGAGCCACAACAAAATCTGATGTCTTCGCTTTTGGAGCCTTTTTGCTAGAGGTTGGATGTGGAAGAAGACCTATTGAGCGAGGACGTGAAGATGAGATTTTGGCGGATTGGGTTTATGGGTTATGGAAGAAGGGTCAGATTATGAAGGCAATGGATCAAGCTTTAGGAAGGGACTATAACGAAGAGGAGGCAGAATTAGTGTTGAGATTAGGACTTTTGTGTTCAAGTTCTAAAGCTGAGGAGAGGCCAAGCATGCGTCAAGTTGTGCAATATTTGAATAGGGAAGTTCTTTTACCAGATTTGTTATCACTAATGTCATCTCCCTCTTGTTTTGGATTCACGTTTGAGACTAATACGGAGTTTGATGTTACAATGTCCTTTCCATCTTCTAGTGGGGATGGCACTCACATTCCAATATCTGAATCGCTTCTCTCCAAAGATCGTTAA 1923 0.4155 MCVSKLTMMLVLLLVTKLVQITSNGLLQLTNETVQQTGHAFHTNPIVLTNTSSFSTTFVFAIRPVTSPASGHGMAFVISPTKAFPSATAGPYLGLFNITNNADPTNHVFAVELDIIQSSEFDDIDGNHVGIDINGLKSMEYASAGYYVNGFQFRNLSLKSGLPMQVWVDYDGGETQINVTLAPINANKPETPLLTLHQDLSQVLTNSSYVGFSSSTSATLIASHYVLGWSFQLNGKAQNLDASKLPKLPPLKRKRSMILLIVLPLLSLCLIIFVSLLVVCYIKKKRKFSEIVEDWEQNYGPHRFKYKDLYFATKGFKEKELLGSGGFGKVYKGTMPGSKIEVAVKKVSHDSQQGMREFIAEIVSIGHLRHRNLVSLLGYCRRKGELLLVYEFMPNGSLDKYLHNQPSITLNWMQRFKIIKGVALGLCYLHEEWEQVVIHRDIKASNVMLDSNFNGRLGDFGLARLYDHEVDPATTHVAGTLGYVAPETMRTGRATTKSDVFAFGAFLLEVGCGRRPIERGREDEILADWVYGLWKKGQIMKAMDQALGRDYNEEEAELVLRLGLLCSSSKAEERPSMRQVVQYLNREVLLPDLLSLMSSPSCFGFTFETNTEFDVTMSFPSSSGDGTHIPISESLLSKDR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00096 640 FunFam Lectin-domain containing receptor kinase A4.3 301 392 - -
Pral1154g00096 640 FunFam L-type lectin-domain containing receptor kinase V.9 9 238 - -
Pral1154g00096 640 Pfam Protein tyrosine and serine/threonine kinase 318 584 IPR001245 GO:0004672|GO:0006468
Pral1154g00096 640 CDD lectin_legume_LecRK_Arcelin_ConA 21 235 IPR001220 GO:0030246
Pral1154g00096 640 SMART serkin_6 316 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00096 640 Pfam Legume lectin domain 18 246 IPR001220 GO:0030246
Pral1154g00096 640 ProSitePatterns Protein kinases ATP-binding region signature. 322 346 IPR017441 GO:0005524
Pral1154g00096 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Pral1154g00096 640 Gene3D Transferase(Phosphotransferase) domain 1 393 589 - -
Pral1154g00096 640 SUPERFAMILY Protein kinase-like (PK-like) 297 600 IPR011009 -
Pral1154g00096 640 Gene3D Phosphorylase Kinase; domain 1 301 392 - -
Pral1154g00096 640 PANTHER - 19 588 - -
Pral1154g00096 640 CDD STKc_IRAK 322 586 - -
Pral1154g00096 640 ProSiteProfiles Protein kinase domain profile. 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00096 640 FunFam L-type lectin-domain containing receptor kinase S.4 393 597 - -
Pral1154g00096 640 Gene3D - 13 247 - -
Pral1154g00096 640 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 253 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00096 Pral-Chr1154 614437 616626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00096 13 622 Receptor kinase-like Gene Family AT2G37710 59.903 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1154g00096 PK_Tyr_Ser-Thr 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00096 - - gmx:100802293 773.852