Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00093 ATGGTGTTCCTTTTGTTGGGGGTGATGTCGCTGGCGATATCGCTAGTGAGTGGCGGAGATACAGGTTTCATCTTTCATGGATTCCAATCAGCTAATTTAAGCATGGATGGTCCTTCTTCTGTTTCCTCTAATGGCCTCCTCCAACTCACCAATAAAGCTAGGACTCAAAAGGGTCGTGCCTTTTACTCCAATCCAGTAGTTTTCACAAACACTTCTTCTTTCTCTACTACTTTTGTTTTCGCCATTAGACCTCAGTATCCAGCTCCAAGTGATCTTGGAATAATGGCTTTTGTGATTTCTCCAACAAAAGCATTTCCAGATGCTCTGCCCAGCCGGTACCTCGGTGTCTTCAATGTAGCCAACAATGGAAACCCCAATAACCATGTGCTTGCTGTAGAATTCTACGCCGTCAAGAACAATGAGTCTGGGGATATCAGTGATAACAGTTTGAATTCCAGAAACTCTACTCCGGCCGGATACTATGCAAATAGGTTTCAGTTTCAAAATTTGAGCCTTGCCAGTGGCCTGCCGATGCAGGTGTGGGTAGATTATGATGGGGGCAAGAGGCAAATTAGCGTCACCGTAGCTCCAATCCATGTTAACAAGCCCAAAACTCCATTGTTAAGATTGTCCCAAGATCTTTCTCAAATTCTAGCCAATGCCAATTATGTTGGATTCTCATCTTCCAATGGGCGGCTGACAGCTTTGCATTACATTCTTGGTTGGAGTTTCCAGCTCAATGGGGAGGCTCAAAACCTTGATGCCCGCAGACTCCCAAAACTCCCACCACATAGAGGAAACGAACAATCTCCAGTTGGGTTACCTCTCCTTTCACTTTGTCTAATTGTTCTTGTTAGTTTACCTATAGTTTATTGCATATGTTGGAAATGGAAGTTTTCTGAGATCGTAGAGGAGTGGGAGCAAGACTATGGTTCTCACAGGTTCAAATACAAAGATCTCTACATCGCCACAAAGGGATTCAGAGAGAAGGAGCTTATAGGTTGTGGTGGATTTGGAAAGGTGTACAAAGGAACAATGCCTGGTTCGAAAGTTGAGGTTGCCGTGAAGAAAGTATCCCATGAATCCCGACAAGGCATGAGGGAATTCATAGCAGAAATTGTGAGTATCGGTCGTCTGCGCCATCGAAACCTTGTATCTCTTTTGGGATATTGCAGGCGAAAAGGTGAGCTTCTTTTGGTTTATAATTTCATGCCAAATGGAAGCTTAGATAAGTACCTCCACAACCAACCCAAAGTGACACTAAATTGGATGCAAAGATTTAGAATCACCAAAGGGGTAGCTTCGGGATTATGCTATCTGCATGAAGAATGGGAGCACGTTGTGGTGCATAGAGATATAAAAGCAAGCAATGTATTGCTAGATTCAGAGTTCAATGCCAGGTTAGGAGATTTCGGTCTTGCAAGACTATATGACCATGGCAGTGATCCTCAAACTACAAAACATGTGGTTGGGACATGGGGTTATCTAGCACCAGAGCAGACAAGAACAAGGAGATTCACGACAAAGTCAGATGTTTTTGCTTTTGGGGCCTTTCTGCTTGAGGTTGTGTGTGGAAGAAAGCCCATAGAGCAAGTAAATGAAGATGAGTGTGTGATTTTAGTAGATTGGGTTTATGAGTTATGGAATAAGGGTGAGATTATTGAGGCAAAGGATCCAAATTTAGGAACAGAATATCCAGCAGAAGAGATAGAGTTGGTGCTGAAACTTGGACTGTTGTGTTCAAGTTGCCAACCAGTGAGTAGGCCAAGCATGCGTCGAGTTGTGCAATATCTAAATTGGGAAATGCCTTTGCCTGATTTGTCATCTTTAAGCTTATATTCTACTTCTCTAGGCTTATCATTTGGGAATTATGGCCTTTGTGATTCCACTGCCTCCGTTCCATCTCACGTTGATCAATCTTTCTCTCACTGTTCAGTAGCTGAATCATTGCTCTCTGGAGGTCGTTGA 1968 0.4329 MVFLLLGVMSLAISLVSGGDTGFIFHGFQSANLSMDGPSSVSSNGLLQLTNKARTQKGRAFYSNPVVFTNTSSFSTTFVFAIRPQYPAPSDLGIMAFVISPTKAFPDALPSRYLGVFNVANNGNPNNHVLAVEFYAVKNNESGDISDNSLNSRNSTPAGYYANRFQFQNLSLASGLPMQVWVDYDGGKRQISVTVAPIHVNKPKTPLLRLSQDLSQILANANYVGFSSSNGRLTALHYILGWSFQLNGEAQNLDARRLPKLPPHRGNEQSPVGLPLLSLCLIVLVSLPIVYCICWKWKFSEIVEEWEQDYGSHRFKYKDLYIATKGFREKELIGCGGFGKVYKGTMPGSKVEVAVKKVSHESRQGMREFIAEIVSIGRLRHRNLVSLLGYCRRKGELLLVYNFMPNGSLDKYLHNQPKVTLNWMQRFRITKGVASGLCYLHEEWEHVVVHRDIKASNVLLDSEFNARLGDFGLARLYDHGSDPQTTKHVVGTWGYLAPEQTRTRRFTTKSDVFAFGAFLLEVVCGRKPIEQVNEDECVILVDWVYELWNKGEIIEAKDPNLGTEYPAEEIELVLKLGLLCSSCQPVSRPSMRRVVQYLNWEMPLPDLSSLSLYSTSLGLSFGNYGLCDSTASVPSHVDQSFSHCSVAESLLSGGR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00093 655 SMART serkin_6 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00093 655 ProSitePatterns Protein kinases ATP-binding region signature. 333 357 IPR017441 GO:0005524
Pral1154g00093 655 CDD lectin_legume_LecRK_Arcelin_ConA 23 248 IPR001220 GO:0030246
Pral1154g00093 655 Gene3D - 19 247 - -
Pral1154g00093 655 FunFam Lectin-domain containing receptor kinase A4.3 312 403 - -
Pral1154g00093 655 Gene3D Phosphorylase Kinase; domain 1 312 403 - -
Pral1154g00093 655 FunFam L-type lectin-domain containing receptor kinase S.4 404 611 - -
Pral1154g00093 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 264 IPR013320 -
Pral1154g00093 655 Pfam Legume lectin domain 22 258 IPR001220 GO:0030246
Pral1154g00093 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral1154g00093 655 Gene3D Transferase(Phosphotransferase) domain 1 404 602 - -
Pral1154g00093 655 Pfam Protein tyrosine and serine/threonine kinase 330 597 IPR001245 GO:0004672|GO:0006468
Pral1154g00093 655 ProSiteProfiles Protein kinase domain profile. 327 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00093 655 PANTHER - 35 602 - -
Pral1154g00093 655 SUPERFAMILY Protein kinase-like (PK-like) 308 606 IPR011009 -
Pral1154g00093 655 FunFam L-type lectin-domain containing receptor kinase V.9 20 249 - -
Pral1154g00093 655 CDD STKc_IRAK 333 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00093 Pral-Chr1154 593401 595368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00093 31 655 Receptor kinase-like Gene Family AT2G37710 57.698 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1154g00093 PK_Tyr_Ser-Thr 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00093 - - jre:108979938 775.778