Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00091 ATGTCTGTGAAGATTGTGGCTCTGGTGTTTTTGCTTGTGACAGCGAGTGGTGAGAATACAAGTTTCATCTTTAACAGTGGCTTCCAATCTGCTCATTTAACTATGGATGGCATTTCAGAGATCACTCCCAATGGCCTACTCAAAGTCACAAATGGAACGAAGGACCAACGGGGACATGCTTTCTACCCCAATCCAATAGCCTTCACCAATTCATCTTCCTTCTCAACTACTTTTGTTTTTGCCATTAGATCTGAATACCCTACTTTGAGTGGTCATGGAATGGCTTTTGTAATTTCCCCCGCAAAAGCATTTCCAGGTGCTTTAAACAGTCAGTATTTAGGTCTCCTCAATGACACCAAAGCCGACGGTACAAGGCATGTTTTCGCAGTGGAGTTCGACACCATACTGAGCGAAGAGTTTGGTGATATCAATGGTAACCATGTCGGAATCGACATTAACAGCTTGAGGTCGGCCAATTCTACTCCTCCAGGGTATTATGATGACGGGTCTCGGTTTCAAAATCTGAGTCTTATCAGTGGCCTTCCAATGCAGGTCTGGGTGGATTATGATGGAGGAAAGAAGCAAATTAGCGTCACCCTTGCTCCCATCAACGTTAACAAATCCAAAACTCCATTGTTAACGTTGTCTCAAGATCTTTCTCATATTATAAACAAGCTAAGTTACGTCGGATTCTCAGCCGGCACTTGTGCTGTGTTAAGTTCTCATTATGTTCTTGGCTGGAGCTTTAAGCTCAATGGGGAGGCTCAACACCTTGTCCTTTCCGAACTCCCGAAGTTACCGGTACTTGGCGGAAGGAAACGATCAATGATTTTGCTGATTGGGTTACCTCTAGTATCACTATGTTTGACTTTTCTTTTGAGTTTATTTATAGTTCATCACATTATGAGAGTGAAGTTTTCTGAGATTCAAGAAGAGTGGGAGCAAGACTATGGCGCTCACAGGCTCAAATACAAAGATCTCTACGTGGCCACAAAGGGATTCAAAGACAAGGAGCTTCTGGGCCGTGGTGGATTTGGCAAGGTCTACAAAGGAACCATCCCGACTTCAAAAGTAGAGGTTGCTGTGAAGAAAGTCTCACATGAATCTCGACAGGGCATGAGGGAATTTGTTGCAGAAATCATTAGTATTGGTCGTCTTCGCCACCGAAACCTCGTACCACTTTTGGGATATTGCAGGCGAAAAAAAGAGCTTCTTTTAGTCTATGAGTTCATGCCAAACGGAAGTTTAGATAAATATCTTCACAACCAGCCAAGCGTGACACTGAATTGGACACAGAGGTTCAAAATCATCAAGGGCGTTGCTTCAGGATTGCATTATCTGCATGAAGAATGTGAAAAAGTGGTCATTCACAGAGACATAAAAGCAAGTAATGTGCTCCTAGATTCAGAATTAAATGGAAGACTAGGAGATTTTGGGCTTGCAAGACTATACGACCATGGCAGTGATCCTGAAACTACACACGTGGTCGGGACATTGGGTTATCTGGCACCGGAGCAGACAAGAACAGGGAGAGCCACGACAAGGTCAGATGTCTTTGCTTTTGGTGCATTCCTACTTGAAGTTGTGTGTGGAAGAAGGCCCATAAAGCAAGTAAATGAAGAGAGTGTGATTTTAGCATATTCGGTTTATAGGTTGTGGAACAGGGGTGAGATTATTGAAGCAACGGATCCAAATTTAGGGACAGAGTATTCATCGGAAGAAGTAGAGTTAGTGTTGAAACTGGGGCTTTTGTGCTCAGATTTCAGACCACTGAGTCGACCAAGCATGCGTCAAGTTGTGCAGTATCTGAATTGGGAAGTTCCTTTGCCCGACATATCATCATCTTTGAGCTTTTGTTCTACTTCTCCAGGGCAGTCGTTTGGGAATGGCCATGGAATTTTTGACTCTACAACGTTGTCCCTTCCATCTTATGTCGAGTCTTTCTCTCAATGTTCAGTAGTGGAATCAGTTCTCTCCGGAGGTCGCTGA 1989 0.4374 MSVKIVALVFLLVTASGENTSFIFNSGFQSAHLTMDGISEITPNGLLKVTNGTKDQRGHAFYPNPIAFTNSSSFSTTFVFAIRSEYPTLSGHGMAFVISPAKAFPGALNSQYLGLLNDTKADGTRHVFAVEFDTILSEEFGDINGNHVGIDINSLRSANSTPPGYYDDGSRFQNLSLISGLPMQVWVDYDGGKKQISVTLAPINVNKSKTPLLTLSQDLSHIINKLSYVGFSAGTCAVLSSHYVLGWSFKLNGEAQHLVLSELPKLPVLGGRKRSMILLIGLPLVSLCLTFLLSLFIVHHIMRVKFSEIQEEWEQDYGAHRLKYKDLYVATKGFKDKELLGRGGFGKVYKGTIPTSKVEVAVKKVSHESRQGMREFVAEIISIGRLRHRNLVPLLGYCRRKKELLLVYEFMPNGSLDKYLHNQPSVTLNWTQRFKIIKGVASGLHYLHEECEKVVIHRDIKASNVLLDSELNGRLGDFGLARLYDHGSDPETTHVVGTLGYLAPEQTRTGRATTRSDVFAFGAFLLEVVCGRRPIKQVNEESVILAYSVYRLWNRGEIIEATDPNLGTEYSSEEVELVLKLGLLCSDFRPLSRPSMRQVVQYLNWEVPLPDISSSLSFCSTSPGQSFGNGHGIFDSTTLSLPSYVESFSQCSVVESVLSGGR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00091 662 Pfam Protein kinase domain 334 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00091 662 FunFam L-type lectin-domain containing receptor kinase S.4 411 616 - -
Pral1154g00091 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 269 IPR013320 -
Pral1154g00091 662 Gene3D - 18 262 - -
Pral1154g00091 662 SMART serkin_6 334 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00091 662 CDD STKc_IRAK 340 604 - -
Pral1154g00091 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Pral1154g00091 662 ProSitePatterns Protein kinases ATP-binding region signature. 340 364 IPR017441 GO:0005524
Pral1154g00091 662 FunFam L-type lectin-domain containing receptor kinase V.9 19 256 - -
Pral1154g00091 662 Gene3D Phosphorylase Kinase; domain 1 319 410 - -
Pral1154g00091 662 Gene3D Transferase(Phosphotransferase) domain 1 411 607 - -
Pral1154g00091 662 PANTHER - 28 607 - -
Pral1154g00091 662 FunFam Lectin-domain containing receptor kinase A4.3 319 410 - -
Pral1154g00091 662 Pfam Legume lectin domain 20 263 IPR001220 GO:0030246
Pral1154g00091 662 SUPERFAMILY Protein kinase-like (PK-like) 311 603 IPR011009 -
Pral1154g00091 662 CDD lectin_legume_LecRK_Arcelin_ConA 20 253 IPR001220 GO:0030246
Pral1154g00091 662 ProSiteProfiles Protein kinase domain profile. 334 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00091 Pral-Chr1154 562992 582167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00091 15 662 Receptor kinase-like Gene Family AT2G37710 59.455 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1154g00091 Pkinase 2.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00091 - - gmx:100802293 845.114