Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00090 ATGGATATGTCTGTGAAGCTTGTGGCTATGTTGTTTTTGCTGGTGATAGCGAGCGGTGAAGATACAAGTTTCATCTTTAATAATGGCTTCCAATCAGCTCATTTAACCATGGATGGTATTTCAGAGATCACTCCCAATGGCCTCCTCCAACTCACAAACGGAACCAGGCAAAAACTAGCCCATGCTTTCTACCCCAATCCAATAGCTTTCACCCCCTCTTCTTCTTTCTCAACTGCTTTTGTTTTCGCCATTAGACCTGAATACCCTACTTTGAGCGGTCATGGAATCGTTTTTCTAATCTCTCCAGAAAAAGCGCTTCCAGGTGCTTTGCCTAGTCAATACTTAGGTCTCTTCAATGACACCAACAATGGCAACAGTACAAACCATGTTTTTGCAGTGGAGCTTGACACCATACAGAGCAGGGAGTTTGATGATATCAATGATAACCATGTCGGAATTGACATTAACAGCTTGAAGTCGGCCAGTTCTACTCCTGCAGGATATTATGATGAAGGGTCTCGGCTTAAAAATCTGAGTCTTATTAGTGGCCTTCCAATGCAGGCGTGGGTGGACTATGACGGAGGAAAGAAGCAAGTTAGCGTCACCCTTGCTCCCATCAACGTTAACAAACCCAAAACTCCGTTGTTAACGTTGTCCCAAGATCTTTCTCATATAATAAAAAATCCCAGTTATGTGGGGTTTTCATCCTCTACTGGGTCTGTGTCAACTTCTCATTATGTTCTTGGGTGGAGCTTCAAGCTCAATGGGGAGGCTCAAAACCTGGTCGTCTCTGAACTCCCGAAGCTACCACGACTCGGAGGAAGGAAACAGTCAATGGTTTTGCTAATTGGGTTGCCTCTGCTTTCTCTATGTTCGATTTTTGCCATGATCTTATCCATATTTTATTACATGTATAGGAAAAAGAAGTTTTCTGAGATTCAAGAAGAGTGGGAGCAAGAATATGGCGCTCACAGGTTCAAATACAAAGATCTCTACGTTGCCACAAAGGGATTCAAAGACAGAGAGCTTCTGGGAAGTGGTGGATTTGGCAGAGTATACAAGGGAACAATGCCAACTTCAAAAGTTGAGGTTGCTGTGAAGAAAATTTCACATGAATCTCGGCAAGGCATGAGGGAATTCGTTGCAGAAATCATAAGCATCGGTCGTTTCCGCCATAGAAACATCGTACCTCTTTTGGGATATTGTAGGCGAAAAGGAGAGCTTCTTCTCGTCTATGATTTCATGCCAAACGGAAGCTTAGATAAATATCTTTATAACCAGCCTAGCGTGACACTGAATTGGATGCAAAGATTCAAAATCATCAAAGGAGTAGCTTCAGGATTGCACTATCTACATGAAGAATGCGAAAAAGTGGTGGTCCACAGAGACATTAAAGCAAGTAATGTCCTGCTAGATTCAGAATTAAATGGAAGAGTAGGAGATTTTGGTCTTGCAAGACTGTACGACCATGGGTGTGATCCTCAAACTACACACGTGGTCGGGACATTGGGTTATTTAGCACCAGAACATACAAGAACAGGGAGAGCCACGACAAGGTCAGATGTCTTTGCTTTTGGTGCGTTTGTGCTTGAGGTTGTGTGTGGAAGAAGGCCCATAGAGCAGGTTAATGAAGAAGAGAGTGTGGTTTTAGTAGATTGGGTTTACGGACTATGGAGTAGGGGTGAGATTATTGAAGCAAAGGATCCAAATTTAGGAACAGAGTATGTGGCAGCAGAGGTTGAGTTGGTATTGAAACTGGGGCTTTTGTGCTCAAATTTCCAACCACAGACCCGACCAAGCATGCGTCAAGTTGTGCAATATCTGAATTGGGAAGTTCCTTTGCCCGACATATCCTCATCATCCTTAGCCTTATGTTCTACTTCTCCGGGGTTGTCATTTGGCAAATCCGGATTTTTTGACTCCACGACGTCGTCCCTTCCATTTTATGCTGACCAGTCTTTCTCTCAATGTTCGGTAGCCGAATCATTTCTCTCTGGGGGTCGTTAA 2007 0.4355 MDMSVKLVAMLFLLVIASGEDTSFIFNNGFQSAHLTMDGISEITPNGLLQLTNGTRQKLAHAFYPNPIAFTPSSSFSTAFVFAIRPEYPTLSGHGIVFLISPEKALPGALPSQYLGLFNDTNNGNSTNHVFAVELDTIQSREFDDINDNHVGIDINSLKSASSTPAGYYDEGSRLKNLSLISGLPMQAWVDYDGGKKQVSVTLAPINVNKPKTPLLTLSQDLSHIIKNPSYVGFSSSTGSVSTSHYVLGWSFKLNGEAQNLVVSELPKLPRLGGRKQSMVLLIGLPLLSLCSIFAMILSIFYYMYRKKKFSEIQEEWEQEYGAHRFKYKDLYVATKGFKDRELLGSGGFGRVYKGTMPTSKVEVAVKKISHESRQGMREFVAEIISIGRFRHRNIVPLLGYCRRKGELLLVYDFMPNGSLDKYLYNQPSVTLNWMQRFKIIKGVASGLHYLHEECEKVVVHRDIKASNVLLDSELNGRVGDFGLARLYDHGCDPQTTHVVGTLGYLAPEHTRTGRATTRSDVFAFGAFVLEVVCGRRPIEQVNEEESVVLVDWVYGLWSRGEIIEAKDPNLGTEYVAAEVELVLKLGLLCSNFQPQTRPSMRQVVQYLNWEVPLPDISSSSLALCSTSPGLSFGKSGFFDSTTSSLPFYADQSFSQCSVAESFLSGGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00090 668 ProSitePatterns Protein kinases ATP-binding region signature. 344 368 IPR017441 GO:0005524
Pral1154g00090 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Pral1154g00090 668 FunFam L-type lectin-domain containing receptor kinase V.9 21 259 - -
Pral1154g00090 668 ProSiteProfiles Protein kinase domain profile. 338 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00090 668 FunFam L-type lectin-domain containing receptor kinase S.4 415 621 - -
Pral1154g00090 668 SUPERFAMILY Protein kinase-like (PK-like) 312 608 IPR011009 -
Pral1154g00090 668 Pfam Legume lectin domain 22 266 IPR001220 GO:0030246
Pral1154g00090 668 Pfam Protein kinase domain 339 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00090 668 CDD STKc_IRAK 344 609 - -
Pral1154g00090 668 PANTHER - 20 612 - -
Pral1154g00090 668 CDD lectin_legume_LecRK_Arcelin_ConA 22 256 IPR001220 GO:0030246
Pral1154g00090 668 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Pral1154g00090 668 Gene3D - 20 266 - -
Pral1154g00090 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 272 IPR013320 -
Pral1154g00090 668 SMART serkin_6 338 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00090 668 FunFam Lectin-domain containing receptor kinase A4.3 323 414 - -
Pral1154g00090 668 Gene3D Transferase(Phosphotransferase) domain 1 415 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00090 Pral-Chr1154 556763 559127 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00090 17 668 Receptor kinase-like Gene Family AT2G37710 61.970 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1154g00090 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00090 - - tcc:18597713 902.894