Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00089 ATGTCTATGATGAAGAAGTTGAAGGCGATGATGATTTTGGTGACGGTGGTGATATCGGCGGTTCAAGTGACAGGTGAAGATACAAGCTTCATCTTTAACAATGGCTTCCAATCAGCTAATTTAACCATGGATGGTATTTCTGAGATCACCCCCAATGGCTTACTTCGACTCACCAACGAAACCAGGCAGGAAAAAGGTCATGCTTTTTATCCCAATCCAATAACTTTCAATGACTCTTCTTGTTTCTCTACCTCTTTTGTTTTCGCCATTAGATCTGAGTACAAAACTCTGAGTGGTCATGGAATCGCTTTTCTAATCTCCCCTGCAAAAGCACTTCCAGGTGCTCGACCCAGTCAGTACCTAGGTCTCTTCAATGAAACCAATAATGGCAACCGTACAAATCATGTTTTTGCCGTGGAACTTGACACCATCCTGAGCAGCGAGTTTGATGATATCAATGATAACCATCTCGGAATCGACATTAATGGCTTGAAGTCAGCCAATTCTTCTCCTGCAGGATATTATCTCAACAGGTCTCACTTTCAGAATTTGAGTCTCATTAGTGGCCTTCCAATGCAGGTGTGGGTGGACTATGACGTAGGAAAGAAGCAAATTAGTGTCACCCTAGCTCCCATCAACGTTGACAAACCCAAAACTCCATTGTTAACATCATACCAGGATCTTTCTCAAATTATAAACAATACTAGTTATGTCGGATTCTCATCCTCCACAGGGTCTGTTTTAACTTCTCATTATGTTCTTGGTTGGAGCTTCAAGCTCAATGGGATGGCTCAAAACCTAGTTATCTCTAAACTCCCAAAGCTACCACGACTTGGTGGAAGAAAAAAGTCTATGATTTTGCTAATCGGGTTACCTTTGCTTTCACTCTGTATAATCTTTATTGCGATTCTATCTGGTTTTTATTACATAAGTAGGAAAAGGAAATTTTCAGAGATTCAAGAAGAGTGGGAGCAAGACTATGGTGCTCAAAGGTTCAAATACAAAGATCTGTACGTGGCCACAAAGGGATTCAAAGACAGAGAGCTTCTGGGAAGTGGTGGATTTGGTAGAGTCTACAAAGGAATAATGCCAATTTCAAAAGTTGAGGTTGCTGTGAAGAAAGTTTCACATGAATCTCGACAAGGCATGAGGGAATTTGTAGCTGAAGTCGTTAGTATTGGTCGTCTTCGCCACCGAAACCTCGTACCTCTTTTGGGATACTGTAGGCGAAAAGGAGAGCTTCTTTTGGTCTATGATTTCATGCAAAATGGAAGCTTAGATAAATATCTCCATAACCAGCCTAGAGTGACACTAAACTGGACACAAAGATTCAGAATCATCAAAGGAGTTGCTTCAGGATTGTGCTACCTACACGAAGAATGTGAAAAAGTGGTGGTCCATAGAGACATAAAAGCAAGCAATGTCCTCCTAGATTCAGAATTGAATGGGAGATTAGGAGATTTCGGTCTTGCAAGATTATACGACCATGGCAGTGATCCTCAAACTACACATGTGGTTGGAACAGTGGGTTATCTAGCACCAGAGCAGACAAGAACTGGGAAAGCGACGACAAGGTCCGATGTGTTTGCCTTTGGTGCATTTTTGCTGGAGGTTGCGTGTGGAAGAAGGCCCATAGAGCAAATAAATGAAGAAGAGAGTGTCATATTAGCAGATTGGGTTTATGAGTTATGGAACAGGGGTGAGATTATTATGGCAAAGGATCAAAATTTGGGAGTGGAGTATTGTGTAGAAGAGGTGGAGTTAGTGTTGAAACTTGGACTTGTGTGTTCAGATTCGAATCCTCTGAGTAGGCCAACCATGCGTCAAGTTGTGCAGTATCTAAATTGGGAGGTTCCTTTACCTGATTTATCATCACTAAGCTTATGTTCTGCTTCTCCAGGCCTATCATTTGGGCGTCATCAAGCATTTCTTCAGTCTACTATGTCCTTTCCATCTTTCGTTGATCAGTCTCTCTCTCACAGTTCTTCAGTAGCTGAGTCGCTTCTCTCTGAAGGTCGTTGA 2022 0.4194 MSMMKKLKAMMILVTVVISAVQVTGEDTSFIFNNGFQSANLTMDGISEITPNGLLRLTNETRQEKGHAFYPNPITFNDSSCFSTSFVFAIRSEYKTLSGHGIAFLISPAKALPGARPSQYLGLFNETNNGNRTNHVFAVELDTILSSEFDDINDNHLGIDINGLKSANSSPAGYYLNRSHFQNLSLISGLPMQVWVDYDVGKKQISVTLAPINVDKPKTPLLTSYQDLSQIINNTSYVGFSSSTGSVLTSHYVLGWSFKLNGMAQNLVISKLPKLPRLGGRKKSMILLIGLPLLSLCIIFIAILSGFYYISRKRKFSEIQEEWEQDYGAQRFKYKDLYVATKGFKDRELLGSGGFGRVYKGIMPISKVEVAVKKVSHESRQGMREFVAEVVSIGRLRHRNLVPLLGYCRRKGELLLVYDFMQNGSLDKYLHNQPRVTLNWTQRFRIIKGVASGLCYLHEECEKVVVHRDIKASNVLLDSELNGRLGDFGLARLYDHGSDPQTTHVVGTVGYLAPEQTRTGKATTRSDVFAFGAFLLEVACGRRPIEQINEEESVILADWVYELWNRGEIIMAKDQNLGVEYCVEEVELVLKLGLVCSDSNPLSRPTMRQVVQYLNWEVPLPDLSSLSLCSASPGLSFGRHQAFLQSTMSFPSFVDQSLSHSSSVAESLLSEGR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00089 673 ProSitePatterns Protein kinases ATP-binding region signature. 350 374 IPR017441 GO:0005524
Pral1154g00089 673 Gene3D Transferase(Phosphotransferase) domain 1 421 626 - -
Pral1154g00089 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pral1154g00089 673 SUPERFAMILY Protein kinase-like (PK-like) 319 614 IPR011009 -
Pral1154g00089 673 Gene3D - 26 271 - -
Pral1154g00089 673 FunFam Lectin-domain containing receptor kinase A4.3 329 420 - -
Pral1154g00089 673 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00089 673 FunFam L-type lectin-domain containing receptor kinase S.4 421 627 - -
Pral1154g00089 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 278 IPR013320 -
Pral1154g00089 673 FunFam L-type lectin-domain containing receptor kinase V.9 27 265 - -
Pral1154g00089 673 Pfam Legume lectin domain 28 273 IPR001220 GO:0030246
Pral1154g00089 673 CDD lectin_legume_LecRK_Arcelin_ConA 28 262 IPR001220 GO:0030246
Pral1154g00089 673 Pfam Protein tyrosine and serine/threonine kinase 347 614 IPR001245 GO:0004672|GO:0006468
Pral1154g00089 673 CDD STKc_IRAK 350 615 - -
Pral1154g00089 673 PANTHER - 36 618 - -
Pral1154g00089 673 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Pral1154g00089 673 ProSiteProfiles Protein kinase domain profile. 344 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00089 Pral-Chr1154 551055 555141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00089 22 673 Receptor kinase-like Gene Family AT2G37710 62.974 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1154g00089 PK_Tyr_Ser-Thr 7.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00089 - - mtr:25498550 902.508