LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1154g00083	ATGATCATCATCAAGCTCGTCGTCACGCTGCTTTTGCTAGCGACAGTATTTGCAACTTCGGAAGGTACAAGCTTCATCTACAATGGCTTCCGCTCTGCTAATTTAGCCATTGACGGCGTTTCTTCCCTCCTCTCCGACGGCCTTCTCCGACTCACCAGCGGCACCAAGCAACAAAAAGGTCACGCCTTTTACTCTGAGCCTATAGCATTCGTCAAAAACTCGTCTTTCTCTACCTCTTTCGTTTTCGCCATTAGATCTGAATACCCGACTCTGAGTGGTCATGGAATAGCTTTCGTAATTTCTTCAACAAAGACACTCCCAGGTGCTCTGCCCAGTCAATTCCTTGGCCTCTTCAATGAAACTAACAATGGCCACCCCACAAACCATGTACTCGCAGTAGAACTCGACACCATTCAGAACAGCGAGTTCGAGGATATCAATGATAACCATGTCGGAATTGACATTAACGGCTTGAATTCAGTGAAATCTGCTCCTGCTGGATATTATGCTGATGGGTCTCAGTTTCAGAACTTGAGCCTTATCAGTGGCCTTCCAATGCAAGTGTGGCTGGACTATGATGGCGGCAAGAATCAAATTAGTGTCACCTTGGCTCCAATCAATGTTAAAAAACCAGAGACTCCATTGTTAACGTTGTCCCATGATCTTTCCCGCATTCTAAGGAGGTCTAGTTATGTCGGATTCTCATCTTCCACGGGTTCAATCTCAACTTCTCATTATATTCTTGGTTGGAGCTTTAAGCTTAATGGGAAGGCTGAAAACCTCGTAATCACTGAACTCCCAAAGCTTCCTCAACTAGCTGATGGTAAAAACGAGCAGTCTATGATTTTGCTAGTTGGAATGCCTTTGATTTCTGTCTGTTTAATTTTTCTGTTAAGTTTGTCTGTTGTTCATTTTATAAAGAGAAAAAAGAAGTTTTCTGAGATGCTTGAAGATTGGGAGCAAGACTACGGTCCTCACAGGTTCAAATACAAGGATCTCTACATTGCCACAAAGGGATTCAGAGAGGAATTGCTTCTGGGAAGTGGTGGTTTTGGTAGAGTCTACAAAGGGATAATGCCAATTTCAAAAATTGAGGTTGCTGTGAAAAGAGTATCCCATGAATCTCGACAAGGTATGAGGGAATTTGTGGCAGAAATTGTAAGTATTGGTCGTCTTCGTCATCGAAACCTTGTACCTCTTTTAGGGTATTGCAGGCGAAAAGGAGAACTTCTTTTAGTTTATGATTTCATGCCAAATGGAAGCTTGGATAAATACCTCTATAATCAACCTAGAGTGACATTGAACTGGACACAGAGATTTCGGATCATCAAAGGGATAGCTTCAGGATTATGCTATTTGCATGAGGAATGGGAGCAAGTGGTTGTTCACAGAGACATAAAAGCCAGCAACATTCTTCTAGATTCAGAATTAAATGGAAGGTTAGGGGATTTTGGTCTTGCAAGATTATGTGACCACGGCAGTGATCCTCAAACCACACACGTGGTCGGAACTCTTGGGTATCTTGCCCCAGAGCAAACCAGAATAAGGAAGGCCACGACAAGCTCAGATGTTTTTGCTTTTGGTGCTTTCACGCTTGAGGTCGTGTGTGGAAGAAGGCCTATAGAGCAAGGAGGAGGAAGCGACGGTGTCGTTTTGGTGGATTGGGTTTATGGTTTCTTCAGAAGGGGTGAAATTGTTGAGGCAAAGGATCAGAATTTACCTATGGGAAGAGAGTATAGGGAAGGGGAGGTGGAATTGGCCTTGAAACTTGGGCTTCTGTGTTCAAATTCTGAACCATTAAGGAGGCCTAACATGCGTCAAGTTGTGCAATATTTAAATGGGGATGTACCTTTGCCTGATTTGTCTTCATTAATATCATCATCATCATCTTCTGGGTTAACGTTTGGGCATCGTCAAGAGACTCATCATGATTCTGCCATGTCCTTCCCATCTTCTATAGACGGCTCATTTTCTCAGAGTTCGTCCATAGCTGAGTCTCTTTTATCCGGAGGTAGATGA	2019	0.4334	MIIIKLVVTLLLLATVFATSEGTSFIYNGFRSANLAIDGVSSLLSDGLLRLTSGTKQQKGHAFYSEPIAFVKNSSFSTSFVFAIRSEYPTLSGHGIAFVISSTKTLPGALPSQFLGLFNETNNGHPTNHVLAVELDTIQNSEFEDINDNHVGIDINGLNSVKSAPAGYYADGSQFQNLSLISGLPMQVWLDYDGGKNQISVTLAPINVKKPETPLLTLSHDLSRILRRSSYVGFSSSTGSISTSHYILGWSFKLNGKAENLVITELPKLPQLADGKNEQSMILLVGMPLISVCLIFLLSLSVVHFIKRKKKFSEMLEDWEQDYGPHRFKYKDLYIATKGFREELLLGSGGFGRVYKGIMPISKIEVAVKRVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDFMPNGSLDKYLYNQPRVTLNWTQRFRIIKGIASGLCYLHEEWEQVVVHRDIKASNILLDSELNGRLGDFGLARLCDHGSDPQTTHVVGTLGYLAPEQTRIRKATTSSDVFAFGAFTLEVVCGRRPIEQGGGSDGVVLVDWVYGFFRRGEIVEAKDQNLPMGREYREGEVELALKLGLLCSNSEPLRRPNMRQVVQYLNGDVPLPDLSSLISSSSSSGLTFGHRQETHHDSAMSFPSSIDGSFSQSSSIAESLLSGGR	672

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1154g00083	672	Pfam	Protein kinase domain	343	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1154g00083	672	Gene3D	-	21	266	-	-
	Pral1154g00083	672	ProSitePatterns	Legume lectins beta-chain signature.	131	137	IPR019825	-
	Pral1154g00083	672	ProSitePatterns	Protein kinases ATP-binding region signature.	346	369	IPR017441	GO:0005524
	Pral1154g00083	672	Gene3D	Transferase(Phosphotransferase) domain 1	417	629	-	-
	Pral1154g00083	672	SUPERFAMILY	Concanavalin A-like lectins/glucanases	23	271	IPR013320	-
	Pral1154g00083	672	Gene3D	Phosphorylase Kinase; domain 1	325	416	-	-
	Pral1154g00083	672	PANTHER	-	38	617	-	-
	Pral1154g00083	672	SMART	serkin_6	340	612	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1154g00083	672	SUPERFAMILY	Protein kinase-like (PK-like)	321	627	IPR011009	-
	Pral1154g00083	672	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	461	473	IPR008271	GO:0004672\|GO:0006468
	Pral1154g00083	672	FunFam	Lectin-domain containing receptor kinase A4.3	325	416	-	-
	Pral1154g00083	672	ProSiteProfiles	Protein kinase domain profile.	340	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1154g00083	672	MobiDBLite	consensus disorder prediction	632	658	-	-
	Pral1154g00083	672	Pfam	Legume lectin domain	23	266	IPR001220	GO:0030246
	Pral1154g00083	672	FunFam	L-type lectin-domain containing receptor kinase S.4	417	624	-	-
	Pral1154g00083	672	CDD	lectin_legume_LecRK_Arcelin_ConA	23	256	IPR001220	GO:0030246
	Pral1154g00083	672	FunFam	L-type lectin-domain containing receptor kinase V.9	22	259	-	-
	Pral1154g00083	672	CDD	STKc_IRAK	346	614	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1154g00083	Pral-Chr1154	531331	534061	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1154g00083	18	672	Receptor kinase-like Gene Family	AT2G37710	61.538	0.0	800

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral1154g00083		Pkinase	3.2e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1154g00083	-		-	gmx:100802293	912.138