Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00082 ATGGCTGCCCTTCTTCTCACACTCTCCTCTGTTTTTCTCTTCCTTCTCGTTCCTGTGTTTTCTCAGGTTGACGAGGTTTTCTTCCCCGGATTTAAGGGTGCCGGAACCAACATAACACTGAACGGTATAGCAGAAATCGAGAAAAACGGAATCTTGCAATTGACGAACCAGACGAGTAGACTAAAGGGTCATGCTTTTTATTCGTCTCCATTCCGGTTCAAGAACTCGTCTTCTGGTAAAGCCTTCTCCTTCTCTGCTTCTTTTGCTCTCGTCACTGTCCCTGTGTTCTTCAAGCTCGGTGGCCATGGCTTGGCTTTTACTATAGCAACTTCCAAAAATCTCAACGGCTTACCCAGTCAGTATCTTGGCCTTCTTAATAACTCCGATGGCGGAAATTTCTCCAACCGTTTCTTCGCCGTCGAGTTCGACACCGTCCAGGACTTCGAATTCCACGACAGGAACGACAACCATGTTGGAATAGACTTAAACAGCTTAGTCTCCAACGCATCTGAGACTGCAGCGTATTACCCCGATGATTCAGGTGTAAAGAAGCGAGATCTCAATCTCTCCGGTGGGACGCCGATTATGGCTTGGGTGGATTACGATTCGGCTGCAAATCTCGTGAGTGTTACTCTCTCTCCTTCTTCTACAAAACCCAGAAAGCCACTGTTGACGTTTCCTGTAGATCTCTCGCCGATTTTTGAAGATTATATGTATGTTGGATTCTCTGCTTCCACGGGTCTTCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGTCCAGCACGAGCTCTCGATCTCTCTTCTCTCCCACATCTTCCAGGTCCGAAGAAGCAGCCGACGAAGCTCATCATCGGCGTAACAGTGCCAGTCATACTGATTACGTTATCGGCGATAGTCCTCGGTATTTATTTGTTTAGGAAAATAAAAAACGCCGACATAATAGAAGCGTGGGAGCTAGAAATCGGACCCCATCGATATTCCTACCAAGAGCTCAAGAAAGCGACAAGAGGTTTCAAGGATAAGGAGCTCCTCGGACAAGGTGGGTTTGGTCGAGTGTACAAAGGAATACTCCCGAGTTCGAAAACCGAGGTCGCAGTCAAACGAGTTTCCCACGACTCCAAACAGGGCCTCAGGGAGTTCGTCTCTGAAATCGCCAGCATTGGGCGGCTCCGTCACCGGAATCTCGTTCAGCTTCTGGGTTGGTGTCGCCGGGGAGGCGACCTCCTCCTCGTATATGATTACATGGCTAATGGGAGCTTGGACAAGTACCTATTCGACCGGCGAGAAACTGTTCTCACCTGGGAACAAAGGTTCAACATCATAAAAGGCGTCGCCTCAGCCCTCCTATATCTCCACGAAGGATATGAACAAGTCGTCCTTCACAGAGACGTCAAAGCAAGCAACGTCTTACTAGACGATGAACTCAACGGAAGATTAGGAGATTTCGGTTTGGCTAGATTATACGAACACGGGGCCAACCCGAGCACGACCAGAGTGGTGGGTACATTAGGCTATCTGGCTCCTGAATTACCTCGAACTGGTAGAGCCACAACGAGCTCCGATGTGTTTGCTTTCGGTGCTCTCATGCTCGAAGTGGTTTGCGGAAGAAGACCTATTGAACCGAAGGCTTTGCCAGAAGAGTTAATTCTAGTGGATTGGGTATGGGACAAGTACAAAGAAGGGAGGTTGCTGGACGCTGTGGATCCAAAGCTGAACGGGGAATATGATGAAGCAGAAGTAGTGACGGTGTTGAAACTGGGTTTGATTTGTTCGAATGATGTTCCTGAGGGCAGGCCCAGAATGAAACAATTGGTGATGTATTTGGAAGGAGAAGTGGAATTGCCAGAGAGTTTGAGAAAACCAGGAGGAGGGAATCGAAACCGGGAAGGGTTTGATGAGTTCTTATTCAATTCGTTTGCATCTTCTTCGTTTGGGAAGATGAGTGCTAGTTCTTATACTGAGCATAGAGACACAGATGGTACTCATTTTGCTTCTTTTAACACTAATTCACCTCTTTCTCTCCTCCATGCCAGAGGAGAAACAAGGTGA 2064 0.4772 MAALLLTLSSVFLFLLVPVFSQVDEVFFPGFKGAGTNITLNGIAEIEKNGILQLTNQTSRLKGHAFYSSPFRFKNSSSGKAFSFSASFALVTVPVFFKLGGHGLAFTIATSKNLNGLPSQYLGLLNNSDGGNFSNRFFAVEFDTVQDFEFHDRNDNHVGIDLNSLVSNASETAAYYPDDSGVKKRDLNLSGGTPIMAWVDYDSAANLVSVTLSPSSTKPRKPLLTFPVDLSPIFEDYMYVGFSASTGLLASSHYILGWSFKINGPARALDLSSLPHLPGPKKQPTKLIIGVTVPVILITLSAIVLGIYLFRKIKNADIIEAWELEIGPHRYSYQELKKATRGFKDKELLGQGGFGRVYKGILPSSKTEVAVKRVSHDSKQGLREFVSEIASIGRLRHRNLVQLLGWCRRGGDLLLVYDYMANGSLDKYLFDRRETVLTWEQRFNIIKGVASALLYLHEGYEQVVLHRDVKASNVLLDDELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTSSDVFAFGALMLEVVCGRRPIEPKALPEELILVDWVWDKYKEGRLLDAVDPKLNGEYDEAEVVTVLKLGLICSNDVPEGRPRMKQLVMYLEGEVELPESLRKPGGGNRNREGFDEFLFNSFASSSFGKMSASSYTEHRDTDGTHFASFNTNSPLSLLHARGETR 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00082 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 281 IPR013320 -
Pral1154g00082 687 Gene3D - 26 271 - -
Pral1154g00082 687 CDD lectin_legume_LecRK_Arcelin_ConA 28 264 IPR001220 GO:0030246
Pral1154g00082 687 FunFam L-type lectin-domain containing receptor kinase S.4 420 626 - -
Pral1154g00082 687 Gene3D Transferase(Phosphotransferase) domain 1 420 626 - -
Pral1154g00082 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Pral1154g00082 687 ProSiteProfiles Protein kinase domain profile. 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00082 687 FunFam L-type lectin-domain containing receptor kinase S.4 22 268 - -
Pral1154g00082 687 Pfam Legume lectin domain 28 274 IPR001220 GO:0030246
Pral1154g00082 687 SMART serkin_6 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00082 687 CDD STKc_IRAK 349 615 - -
Pral1154g00082 687 Pfam Protein kinase domain 343 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00082 687 PANTHER - 18 620 - -
Pral1154g00082 687 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Pral1154g00082 687 SUPERFAMILY Protein kinase-like (PK-like) 325 619 IPR011009 -
Pral1154g00082 687 FunFam L-type lectin-domain containing receptor kinase S.1 328 419 - -
Pral1154g00082 687 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00082 Pral-Chr1154 518540 521168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00082 19 626 Receptor kinase-like Gene Family AT3G55550 60.976 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1154g00082 Lectin_legB 1.2e-70 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00082 - - jre:109006813 994.186