Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00073 ATGAAGATACCTACCAGCTTCTATCTTCTTCTTCTCTGCTCTTTCTCATCATTAGTCATATCTTTTAGCCATTGTCCAGATTGTGGTCGCACCCATGTCCCATTCCCACTTAGCACCAACCCTCATTGTGGCGACCCATCTTACAAGGTTCGATGCCATAAAGGTTCCCTCTGGTTCAACGCTCTCAATGGTTCCTCCTACATGATCACCACCATCAGCTCCCAAAGGCAGCGTTTCGTAATCCGGCAGCCCGGTCTAGCCGGCCACCACACCTGCGTCTCCTCCGATTTCCGAACCCAAGGCATGTGGCTGGACCCAAACGGACCCTTCAACATTACCTCCAGTAACACCCTCGTACTCATGAACTGCTCCGAAGAGGTATTGACTCTCTTGTGGAATTGCTCTTCGTCAAGCATCTGTCATACTTATGTTAAGGCCAGAGCTGCCAAGGCGTGCAGCGGCGAGATATGCTGCACCGTGAAGACTGGGGGGTCGGCGACGGAGTATAGAATTAGGGTGAGGAAAGAGCGTTGCGCGGCGTACGTGAGTTTCCCGAATTTGGATGATTCAGCTCCGGTGAGTGAGTGGCCGGAGCCCGGGGTGGAGATAGAATGGGAGTTGCCGCAGGAGCCTGTGTGCAAGGTGCCGGCAGATTGTGGTGGCTTGGCAAATTCGGCATGCTCGCCGTCGCCGGTTCCGGCTATGGGTGGAGTGAGGAAGTGCTCGTGCAACTCTGGTTTTCAGTGGGATCCTGTGAACGGAATATGTCAGAATATCAGGTGTGAACAGGGAAGAGGATGCACGCGTCATAGTAACAAGAAAGCTCTACTTAGCCGAGGCTTGGCATTTGCTGCGGCTGCCATGATCACCGGAATCCTGATCGCTGCAATGGTTTTTCGCTACCGGAGGCGGAAAGCAACCCAACTTATGAGCGTAAACAGAGCACGTGACATATTGGACGCCGACAACAATAGCGGAAGATCAGCCAAGATTTTCACCATCAAAGATGTCACAAAAGCCACCAACAACTTCTCGAAACACAACCTCCTCGGCTCCGGCGGCTTTGGCGAGGTTTTCATGGGCACGCTGGCCGACGGCACTCTCACGGCCATCAAGCGCGCCAAGCTCGGTAACTCCCGCGCCGTCGAGCAGATCCTCAACGAGGTTCGAATCCTCTGCCAAATCAACCACCGCAGCCTCGTACGCCTCCTAGGTTGCTGCATCGACCTCCACAACGAACCCCTCCTCGTGTACGAATATGTCCCCAACGGAACCCTCTACGACCACCTCCACAACACCAATAAGTGGGCCCCACTCCGGTGGCATCGACGGCTGAAAATCGCCCATCAAACAGCAGAAGGACTCTCCTACCTTCACAACTCAGCCATACCCAGAATCTTCCACAGAGACATAAAGTCGAGCAACATCCTCTTAGACCACAACCTTAACGCTAAAGTCTCAGACTTCGGACTTTCCAAGTTGGCTCTGAGCGAAGCGAGTCACATCACAACGTGTGCGCAAGGCACATTGGGATATCTTGACCCAGAGTACTACTTAAATTTTCAGCTGACGGATAAGAGCGATGTGTACAGTTTTGGGGTGGTTCTGTTGGAGATATTGACGTCGAAGAAGGCTCTGGATTTTGGGAGAGACGAGGAAGATGTAAACTTGGTGGTGTTAGTGAAGAGGGCGATGAAGAATACGACGTTGATGGAAGTGATTGATCCAATGGTGAAGATGGGAGCTAGTAAGTCGGAGTTGGATAGTATCAAAACTTTGGGGTGTCTTGCGATTGCATGTTTAGACGAACAGAGACAAAATAGACCGTCCATGAAAGATGCTGCTGATGAGATTGAACACATTCTTCAAACTCTTTCTTCTGATACTGGCTTCATGGTTGAAGCTTCCGACGAGTTTTTCTTACAGTGA 1929 0.5148 MKIPTSFYLLLLCSFSSLVISFSHCPDCGRTHVPFPLSTNPHCGDPSYKVRCHKGSLWFNALNGSSYMITTISSQRQRFVIRQPGLAGHHTCVSSDFRTQGMWLDPNGPFNITSSNTLVLMNCSEEVLTLLWNCSSSSICHTYVKARAAKACSGEICCTVKTGGSATEYRIRVRKERCAAYVSFPNLDDSAPVSEWPEPGVEIEWELPQEPVCKVPADCGGLANSACSPSPVPAMGGVRKCSCNSGFQWDPVNGICQNIRCEQGRGCTRHSNKKALLSRGLAFAAAAMITGILIAAMVFRYRRRKATQLMSVNRARDILDADNNSGRSAKIFTIKDVTKATNNFSKHNLLGSGGFGEVFMGTLADGTLTAIKRAKLGNSRAVEQILNEVRILCQINHRSLVRLLGCCIDLHNEPLLVYEYVPNGTLYDHLHNTNKWAPLRWHRRLKIAHQTAEGLSYLHNSAIPRIFHRDIKSSNILLDHNLNAKVSDFGLSKLALSEASHITTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLLEILTSKKALDFGRDEEDVNLVVLVKRAMKNTTLMEVIDPMVKMGASKSELDSIKTLGCLAIACLDEQRQNRPSMKDAADEIEHILQTLSSDTGFMVEASDEFFLQ 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00073 642 SMART serkin_6 344 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00073 642 Gene3D Phosphorylase Kinase; domain 1 317 420 - -
Pral1154g00073 642 Gene3D Transferase(Phosphotransferase) domain 1 421 636 - -
Pral1154g00073 642 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 317 420 - -
Pral1154g00073 642 CDD STKc_IRAK 350 621 - -
Pral1154g00073 642 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 626 IPR044652 GO:0004672
Pral1154g00073 642 ProSiteProfiles Protein kinase domain profile. 344 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1154g00073 642 FunFam Wall-associated receptor kinase-like 20 421 630 - -
Pral1154g00073 642 SUPERFAMILY Protein kinase-like (PK-like) 328 623 IPR011009 -
Pral1154g00073 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Pral1154g00073 642 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Pral1154g00073 642 Pfam Wall-associated receptor kinase galacturonan-binding 25 81 IPR025287 GO:0030247
Pral1154g00073 642 Pfam Protein tyrosine and serine/threonine kinase 347 615 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00073 Pral-Chr1154 435299 437783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00073 25 628 Receptor kinase-like Gene Family AT5G02070 53.084 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1154g00073 PK_Tyr_Ser-Thr 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00073 - - pcin:129288281 1089.72