Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1154g00052 ATGGCTTCGAATCAACAAGTGAAGCTTTTCGGAATCGTAGGAAGCCCAGTTGTGACGAGAGCAGAGATTGCTCTGAAACTCAAGGGAGTGCAATATGAGTACGTTCATGAATCCTTGACTAACAAGAGCGATCTTCTTCTCAAGTACAACCCAGTTCACAAGAAGGTCCCTGTGCTTCTTCACAACGAGAAGCCCGTCTGTGAGTCTCTTGTGGTCGTTGAATACGTCGATGAGGCTTGGACTGGCTACCCCATCTTGCCTTCTGATCCTTATCAAAGAGCCCTGGCTCGTTTCTGGTCGAAGTTCATCGATGACAAGTTGTTGCCCGCGGTATTTAAAGCAGCGTTCAACCCAGACGTGAAGGAGAGGGAAAAGGGAGCTGAAGAAGCAAGAGAGGCTCTGAAAATTCTGGACAACGAGCTGAAAGGGAAGTTCTTTAATGGAGATTCAATTGGGTTTCTGGACATCGCTGCTCTGTTCATCGCTTTCTGGATGCCGATAATTCAAGAAGCTGGTGGGCTTGATCTGTCCAGTGCTGAGAGATATCCAAAGCTAGAGAAGTGGGGTCAAGAGATTTTGAATCACCCAGTTGTGAAAGGAGCTTTGCCTCCCAGAGAACATCTCCTCGCCTCCTTCAAAACTCGCTTTCAGAGCATCGCTGCTTCAAATTTACAAGAAGTGAAGCTTTTCGGAACCGTAGGAAGCCTATTTGTGACGAGAGCAGAGATTGCTCTGAAACTCAAGGGAGTGGAATATGAGTACATTCATGAGTCCTTGACCAACAAAAGCGATCTTCTTCTCAAGTACAACCCAGTTCACAAGAAGGTCCCTGTGCTTCTTCACAACGAGAAGCCCATCTGTGAGTCTCTTGTGGTCGTTGAATACGTCGATGAGGCTTGGACTGGCTACCCTATCCTGCCTTCTGATCCTTATCAAAGAGCCCTGGCTCGTTTCTGGTCTAGGTTCATCGATGACAAGTTGTTGCCCGCGGGATTTAAAGCAGCGTGGAACCCGGACGTGAAGGAGAGGGAAAAGGGAGCTGAAGAAGCAACAGAGGCTCTGAAAATTCTGGAAAACGAGCTGAAAGGGAAGTTCTTTAATGGGGATTCAATTGGGTTAGTGGATATCGCCGCTCTGTTCATCGCTTTCTGGATGCCGATAATTCAAGAAGCTGGTGGGCTTGATCTGTACCGTGCTGAGACATATCCCAAGCTAGAGAAGTGGGGTCAAGAGATTTTGAATCACCCAGTGGTGAAAGGAGTTTTGCCTCCCAGAGAACATCTCCTCGCCTTCTTCAAAACTCGCTTTCAGAGCATCGCTGCTTCAAAGTAG 1332 0.4775 MASNQQVKLFGIVGSPVVTRAEIALKLKGVQYEYVHESLTNKSDLLLKYNPVHKKVPVLLHNEKPVCESLVVVEYVDEAWTGYPILPSDPYQRALARFWSKFIDDKLLPAVFKAAFNPDVKEREKGAEEAREALKILDNELKGKFFNGDSIGFLDIAALFIAFWMPIIQEAGGLDLSSAERYPKLEKWGQEILNHPVVKGALPPREHLLASFKTRFQSIAASNLQEVKLFGTVGSLFVTRAEIALKLKGVEYEYIHESLTNKSDLLLKYNPVHKKVPVLLHNEKPICESLVVVEYVDEAWTGYPILPSDPYQRALARFWSRFIDDKLLPAGFKAAWNPDVKEREKGAEEATEALKILENELKGKFFNGDSIGLVDIAALFIAFWMPIIQEAGGLDLYRAETYPKLEKWGQEILNHPVVKGVLPPREHLLAFFKTRFQSIAASK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1154g00052 443 FunFam Glutathione S-transferase GSTU6 222 306 - -
Pral1154g00052 443 FunFam Tau class glutathione S-transferase 86 222 - -
Pral1154g00052 443 Coils Coil 120 140 - -
Pral1154g00052 443 FunFam Glutathione S-transferase GSTU6 2 86 - -
Pral1154g00052 443 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Pral1154g00052 443 Gene3D - 309 443 - -
Pral1154g00052 443 Gene3D - 89 221 - -
Pral1154g00052 443 Pfam Glutathione S-transferase, N-terminal domain 226 298 IPR004045 -
Pral1154g00052 443 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Pral1154g00052 443 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 225 304 IPR004045 -
Pral1154g00052 443 SUPERFAMILY Thioredoxin-like 226 328 IPR036249 -
Pral1154g00052 443 CDD GST_N_Tau 227 300 - -
Pral1154g00052 443 CDD GST_C_Tau 310 435 IPR045074 GO:0004364|GO:0006749
Pral1154g00052 443 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 216 IPR010987 -
Pral1154g00052 443 SUPERFAMILY GST C-terminal domain-like 78 218 IPR036282 -
Pral1154g00052 443 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 309 436 IPR010987 -
Pral1154g00052 443 FunFam Tau class glutathione S-transferase 306 442 - -
Pral1154g00052 443 SFLD Main (cytGST) 4 222 - -
Pral1154g00052 443 SFLD Main (cytGST) 225 442 - -
Pral1154g00052 443 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 231 427 IPR045073 -
Pral1154g00052 443 SFLD Main.3: Omega- and Tau-like 225 442 IPR045073 -
Pral1154g00052 443 SFLD Main.3: Omega- and Tau-like 4 222 IPR045073 -
Pral1154g00052 443 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Pral1154g00052 443 Gene3D Glutaredoxin 1 88 - -
Pral1154g00052 443 Gene3D Glutaredoxin 222 308 - -
Pral1154g00052 443 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Pral1154g00052 443 SUPERFAMILY GST C-terminal domain-like 298 438 IPR036282 -
Pral1154g00052 443 Coils Coil 340 360 - -
Pral1154g00052 443 CDD GST_N_Tau 7 80 - -
Pral1154g00052 443 Pfam Glutathione S-transferase, C-terminal domain 109 196 IPR004046 -
Pral1154g00052 443 Pfam Glutathione S-transferase, C-terminal domain 335 416 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1154g00052 Pral-Chr1154 274897 280961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1154g00052 225 442 Glutathione S-transferase Gene Family AT3G09270 51.584 4.19e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1154g00052 K00799 - egt:105969932 438.343