Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1154g00003 | ATGATTGTGGCTATGGACTTGAATGCCTCACCGGTGCCCGAGGAAGATGAGGATATTTTTGAGAGACATATAGAAGAGTATATCCAACCAGAAGAACGCATAGAAACTGCAGTTGATATAGCGCGCCGGGAGCGTGAAGAAAGGAAAAGGCGGTTGAAAAGAGAACGGACAGATGATAGACCTGCCCATGTATCACAGTCAACGACTGGTTATGATCAGACCTTTCATGCAAAGTCTTTTAAGTCATATGATAAGAGTAGGCTTCCTCCAGGGTGGTTGGATTGCCCTTCATTTGGTCAGGAAATATATTGCTTGATACCTTCCAAGGTTCCACTTGGTGAATCATTCAATGACTGTATTGCTCCTGGTCGAAGATACTCTTTTAAACAAGTGATACATCAACAAAGAGTTCTAGGGAGAAAACTTGGTTTGGTTATTGATCTGACGAATACTACACGTTACTATCCAGTTTCAGATCTGAAGAAAGAGGGTATCAAGCATATTAAGATTCAATGTAAGGGGCGTGATTCTGTGCCTGACAATTTGTCTGTGAATCAATTTGTCCATGAGGTTACTCAGTTTCTATCACGTCAAAAACAAGCAAAGAAGTATATACTTGTCCATTGTACGCATGGACATAATCGTACTGGGTACATGATTGTTCATTATCTTATGCGCTCTCTGTCTATGTCTGTCACCCAGGCAATTAAAATATTTTCTGAAGCACGCCCCCCAGGAATTTATAAACCTGATTATATTGATGCTCTGTACACTTTTTATCATGAAAAAAGGCCTGAAATGGTAGTTTGTCCTCCTACACCAGAGTGGAAGAGATCCTCTGAATTTGATCTCAACGGTGAAGCAATGCCAGATGATGATGATGATGATGGAGTGCCAGGTCCTCCTCAAGAGAACCATGAGAAAGATACAATAATGACAAATGACGATGTTTTGGGAGATGAAATACCTATTGATCAACAAGATGGATTTCGACAGTTCTGTTATCAATCTCTGAAATTGAATACCGGGGCTAGAGGACACGCACATTTTCCAGGTTCACACCCAGTTTCTCTTAATAGGGAAAATTTACAATTGTTACGACAGCGATATTATTATGCAACATGGAAAGCCGATGGAACAAGATATATGATGCTAATAACTATGGATGGCTGTTACTTGATTGATAGAAGTTTCAATTTTCGAAGGGTGCAAATGAGGTTTCCTTGCAGAGGCTCAAATGATGGTTTGGCTGAGAAGACCCACCACTACACGTTACTTGATGGGGAGATGATCATTGATACGTTGCCTGATTCACAGAAACAGGAGAGGAGATATCTTATATATGATATGATAGCAATTAACCATGTACCAGTAATAGAGCGACCGTTCTATGAACGGTGGAAGATGCTTGAGAAAGAGGTGATTGAACCTAGAAACCAGGAACGGCATAATACATACCAGAGTAGAAATCCTTATTATAGATATGACCTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTAAATGAATTCATTAAGAAACTCTCACATGATGCAGATGGCCTCATATTTCAGGGTTGGGATGATCCTTATGTACCCCGCACTCATGAAGGCCTCCTGAAGTGGAAATATCCTGAGATGAATTCAGTAGATTTTCTCTTTGAGATTGATGATGATCGTCAGTCACTGTTCCTTAATGAACGAGGAAAGAAGAGACTCATGGAAGGGAGTAGAGTTGCATTCAGAGATGGTTCAGATCCCTTGCTTTATTCGGGGAAGATTATAGAGTGTTCTTGGGATTTAAATGAACAGGAATGGGTATACATGCGAACCAGGACAGATAAATCAACTCCAAATGATGTTAATACTTACAAGAAGGTTATGCGGAGCATAAAAGACAACATCACACAGGATATCTTGTTGAATGAAATTTACGAGATAATTCGCCTTCCGATGTATGCTGACAGGATAAAAAATGACAGCAAAGCCCACCACCATTTTGGTGCAGCACGCCGGAGGTGA | 2049 | 0.4061 | MIVAMDLNASPVPEEDEDIFERHIEEYIQPEERIETAVDIARREREERKRRLKRERTDDRPAHVSQSTTGYDQTFHAKSFKSYDKSRLPPGWLDCPSFGQEIYCLIPSKVPLGESFNDCIAPGRRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVSDLKKEGIKHIKIQCKGRDSVPDNLSVNQFVHEVTQFLSRQKQAKKYILVHCTHGHNRTGYMIVHYLMRSLSMSVTQAIKIFSEARPPGIYKPDYIDALYTFYHEKRPEMVVCPPTPEWKRSSEFDLNGEAMPDDDDDDGVPGPPQENHEKDTIMTNDDVLGDEIPIDQQDGFRQFCYQSLKLNTGARGHAHFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGSNDGLAEKTHHYTLLDGEMIIDTLPDSQKQERRYLIYDMIAINHVPVIERPFYERWKMLEKEVIEPRNQERHNTYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLNEFIKKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEIDDDRQSLFLNERGKKRLMEGSRVAFRDGSDPLLYSGKIIECSWDLNEQEWVYMRTRTDKSTPNDVNTYKKVMRSIKDNITQDILLNEIYEIIRLPMYADRIKNDSKAHHHFGAARRR | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1154g00003 | 682 | MobiDBLite | consensus disorder prediction | 45 | 71 | - | - | |
Pral1154g00003 | 682 | Gene3D | - | 553 | 644 | IPR012340 | - | |
Pral1154g00003 | 682 | CDD | RNA_5'-triphosphatase | 91 | 257 | - | - | |
Pral1154g00003 | 682 | MobiDBLite | consensus disorder prediction | 283 | 311 | - | - | |
Pral1154g00003 | 682 | SUPERFAMILY | Nucleic acid-binding proteins | 555 | 668 | IPR012340 | - | |
Pral1154g00003 | 682 | FunFam | mRNA capping enzyme, putative | 313 | 550 | - | - | |
Pral1154g00003 | 682 | Gene3D | Protein tyrosine phosphatase superfamily | 62 | 283 | IPR029021 | - | |
Pral1154g00003 | 682 | Pfam | mRNA capping enzyme, C-terminal domain | 557 | 649 | IPR013846 | - | |
Pral1154g00003 | 682 | Pfam | Dual specificity phosphatase, catalytic domain | 140 | 260 | IPR000340 | GO:0008138|GO:0016311 | |
Pral1154g00003 | 682 | Pfam | mRNA capping enzyme, catalytic domain | 354 | 552 | IPR001339 | GO:0004484|GO:0005524|GO:0006370 | |
Pral1154g00003 | 682 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 207 | 217 | IPR016130 | GO:0016311|GO:0016791 | |
Pral1154g00003 | 682 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 88 | 278 | IPR029021 | - | |
Pral1154g00003 | 682 | PIRSF | mRNA_capping_HCE | 74 | 682 | IPR017074 | GO:0004484|GO:0006370|GO:0140818 | |
Pral1154g00003 | 682 | Gene3D | DNA ligase/mRNA capping enzyme | 313 | 552 | - | - | |
Pral1154g00003 | 682 | FunFam | mRNA capping enzyme family protein | 84 | 298 | - | - | |
Pral1154g00003 | 682 | SMART | dsp_5 | 122 | 262 | IPR020422 | GO:0006470|GO:0008138 | |
Pral1154g00003 | 682 | SUPERFAMILY | DNA ligase/mRNA capping enzyme, catalytic domain | 315 | 553 | - | - | |
Pral1154g00003 | 682 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 115 | 266 | IPR020422 | GO:0006470|GO:0008138 | |
Pral1154g00003 | 682 | FunFam | mRNA capping enzyme family protein | 551 | 659 | - | - | |
Pral1154g00003 | 682 | PANTHER | MRNA-CAPPING ENZYME | 83 | 664 | - | - | |
Pral1154g00003 | 682 | CDD | Adenylation_mRNA_capping | 350 | 553 | IPR001339 | GO:0004484|GO:0005524|GO:0006370 | |
Pral1154g00003 | 682 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 185 | 254 | IPR000387 | GO:0016311|GO:0016791 | |
Pral1154g00003 | 682 | Coils | Coil | 38 | 58 | - | - | |
Pral1154g00003 | 682 | MobiDBLite | consensus disorder prediction | 45 | 62 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1154g00003 | Pral-Chr1154 | 12289 | 24863 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1154g00003 | 1 | 682 | Protein tyrosine phosphatase (PTP) family | AT3G09100 | 70.203 | 0.0 | 961 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1154g00003 | K13917 | - | gmx:100806992 | 1176.77 |