Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1150g00002 ATGTGGCCCCACTTGATGATGGGGTTCTCCGATTACATTCAAGCATTAGAATCTGAACGCCGTAAAATCCATGTCTTCTCCAAGGAGCTTCCTCTTTCCTTGGAGCTCGTTACCCAAGCCATTGAAGCCTGTAGGCTCCAGTTAAGTGGAAGAACGTCGTCGGGGACGAATTTGAATAATTTGAATGGCCAATCGGAGTGTTCAAGACAGACATCATCGGAAGGACTTGTTTTGGAGGAGTTCATACCTATAAAGAAAAGGACATCCTCGGATTGTGGGGAAGACGATGAAGATGAGCAAAACCCGCTTGAACGCAAGATTGCAAAGGATAATAAGAACGCTGATAAGAGCAAATCGGATTGGCTTAGATCCGTACAACTCTGGAATCCACAATCCCCAGTTAAAGAGGATATTCCTCGGAAAACGTCGGTGTTGGAAGTAAAGAAAGATGGAGGTGCTTTCGAGCCATTCCACAGAGAACCAAGTGTTGGAAATACTACTTCGTTAACGGCCAAAGCATGCTTGTCGTCGGCGCCGGCGCCGGCGCCGGCCCCTCCAGTCGCCGGAAGCAAAAAGAAAGAAGATAAAGAAGCACATAATAAAAGGAAGCAACGGCGGTGCTGGTCTCAGGAGCTGCACAGGCGCTTCGTGAACGTCCTTCAGCAACTTGGTGGAGCGGATTCTGCAACACCGAAGCAGATAAGGGAACTTATGAAGGTTGATGGCCTAACAAATGATGAAGTGAAGAGTCATTTACAGAAATTTCGATTGCACACGAGGAGGTCAAGCCCATTGATTCAGAACAATGGCGATTCGCAAGCGGCTCCATTTGTACTGGTGGGGAACTTTATAGTGCAACCGCCGGAACATGCAGCGGCGGTGGCTACTTTGAAGGCGTCAGAGAAAATGCCGACGCTGGGGGCGCCGCTGCCTGGAATTTATGCGCCGGTTCCGATGAAGGGTGATGGGAGGCAACTGGATTTGGGAAATAACTGTTGTGGACGCGTACGTTCAAATTCAGAAGGCAGCGAAGTGGCGGATCATTCAAATTCACCAACTTCGTCTTCCTCCACACACATTTGA 1083 0.4894 MWPHLMMGFSDYIQALESERRKIHVFSKELPLSLELVTQAIEACRLQLSGRTSSGTNLNNLNGQSECSRQTSSEGLVLEEFIPIKKRTSSDCGEDDEDEQNPLERKIAKDNKNADKSKSDWLRSVQLWNPQSPVKEDIPRKTSVLEVKKDGGAFEPFHREPSVGNTTSLTAKACLSSAPAPAPAPPVAGSKKKEDKEAHNKRKQRRCWSQELHRRFVNVLQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSSPLIQNNGDSQAAPFVLVGNFIVQPPEHAAAVATLKASEKMPTLGAPLPGIYAPVPMKGDGRQLDLGNNCCGRVRSNSEGSEVADHSNSPTSSSSTHI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1150g00002 360 Gene3D - 202 260 - -
Pral1150g00002 360 NCBIfam myb-like DNA-binding domain, SHAQKYF class 203 258 IPR006447 GO:0003677
Pral1150g00002 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 260 IPR017930 -
Pral1150g00002 360 MobiDBLite consensus disorder prediction 335 360 - -
Pral1150g00002 360 MobiDBLite consensus disorder prediction 176 206 - -
Pral1150g00002 360 SUPERFAMILY Homeodomain-like 201 261 IPR009057 -
Pral1150g00002 360 MobiDBLite consensus disorder prediction 189 205 - -
Pral1150g00002 360 FunFam Myb family transcription factor 202 260 - -
Pral1150g00002 360 MobiDBLite consensus disorder prediction 52 72 - -
Pral1150g00002 360 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 315 IPR044787 GO:0003700|GO:0006355
Pral1150g00002 360 MobiDBLite consensus disorder prediction 88 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1150g00002 Pral-Chr1150 14338 15886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1150g00002 11 253 G2-like Transcription Factor Family AT1G25550 53.226 1.32e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral1150g00002 None None None