Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral114g00026 ATGAAAACTACAGGTTGTGCTTTAATCAAAGATATCAATGATAGCAATGATACATTGCCAATTGAGGCTTGGGTACTAAGAAAATGGTTTGTCCTTGAGAAGGCTCCTCCACAGGCAATATGGAAGGTCGGGATGATTCTTGTCAATGGGCAGGGTTCAAGAATTAAGGGGTATGTCACCCAGAGAAATCTAATCCAGCGTTATGAAACGTTTCCAGTGGAAGGAGTTGTCTATCACTTTGAAAATTTTAAGGTGCTTGAAAATACTAATTACTACAAAGTAACTGCGCACCCGTACAAATTGAGCTTCCACAATAGCACATACTGCAAGGAATGTGATGCTCAGATCCCATCGAATGCATTTAACTTTGTACCTTTAAGGGATATTGCTAACTACAAGGCTTCAAATCCAGAATTAATAGATGTTATAGGATTTCTGAATTCATTCGGGAATCTTTATGATCAAAGACGTGAATATGATGTGGTCAAGAGGTTGAACTTCACAATTTCGGACAAGGAGAAAAATGATGTCTGTGTAGTACTCTTTGGCAATTGTGCAAGTGTGACATTCAATAGTAGAACGCACGATTTGAAATCTCCCATAGTTGTTCTAGTCTGCTTTGCAAAAATTAATTTTACCACAGGATATGGCCACATAAGCAATGTCTTTGACGCCATTAAAGTGATTTTTAACCCGGACATTCCTGAGGCCAAGATTCTTATCAACAGTCTCAATAGTGACCCAACCAAAATTGGGATGTTCCTTCTAATTACAAGAAATGGATATCGTCACAAAGGTCACCATACAAAAGGTGGAACAGCATATGGTTGGAAATACGACGGATGCAAGTGTGATGCTAAGCCCCAACAAGATAAGGAAAAGCTTTTTTGCAAAAAGCGTTGTCAAGCCATAAATGAGACACACCCCAAATTCAAGGTTCATTATAAGGTGTATGATTCCAACAGAAAGTGTTCAGTTATTTTTTTCAATCGCCTTGCTAAAGAACTTCTTGGAACCACCACTGAAATTCAGGCCAAGAAATTGGAGAAGGAGACCACATTTTCATTTCCAAAGGACTTGGAGAATTGTGTTGGGAAAGAGTTAGTGGTAAGACTGAAGGGCTCAAGTGATGAACCAAAGAAGGTCAAATATTCAAAAGAAACATCTACTGAGGAGAACAGATTGAACAAAGACAGTGCTCGGGCTTCTGCACCAAGAAACCTGACAATAGATATGGATCAAGATCGAATAGAAGAAGTGGAAGCACCTAATCTTTCTGCACCAACAGTAGCATCTAGACGGGGATGCAAGAAATTAAAGAAGGAAGAATAA 1332 0.3904 MKTTGCALIKDINDSNDTLPIEAWVLRKWFVLEKAPPQAIWKVGMILVNGQGSRIKGYVTQRNLIQRYETFPVEGVVYHFENFKVLENTNYYKVTAHPYKLSFHNSTYCKECDAQIPSNAFNFVPLRDIANYKASNPELIDVIGFLNSFGNLYDQRREYDVVKRLNFTISDKEKNDVCVVLFGNCASVTFNSRTHDLKSPIVVLVCFAKINFTTGYGHISNVFDAIKVIFNPDIPEAKILINSLNSDPTKIGMFLLITRNGYRHKGHHTKGGTAYGWKYDGCKCDAKPQQDKEKLFCKKRCQAINETHPKFKVHYKVYDSNRKCSVIFFNRLAKELLGTTTEIQAKKLEKETTFSFPKDLENCVGKELVVRLKGSSDEPKKVKYSKETSTEENRLNKDSARASAPRNLTIDMDQDRIEEVEAPNLSAPTVASRRGCKKLKKEE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral114g00026 443 CDD RPA1_DBD_A_like 25 107 - -
Pral114g00026 443 MobiDBLite consensus disorder prediction 379 399 - -
Pral114g00026 443 MobiDBLite consensus disorder prediction 379 443 - -
Pral114g00026 443 Pfam Domain of unknown function DUF223 45 131 IPR003871 -
Pral114g00026 443 Gene3D - 267 398 IPR012340 -
Pral114g00026 443 Gene3D - 6 112 IPR012340 -
Pral114g00026 443 SUPERFAMILY Nucleic acid-binding proteins 121 249 IPR012340 -
Pral114g00026 443 SUPERFAMILY Nucleic acid-binding proteins 8 113 IPR012340 -
Pral114g00026 443 Gene3D - 114 251 IPR012340 -
Pral114g00026 443 SUPERFAMILY Nucleic acid-binding proteins 277 380 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral114g00026 Pral-Chr114 396131 398387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral114g00026 47 247 Core DNA Replication Machinery Family AT5G61000 23.223 1.29e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral114g00026 - - pcin:129301944 242.662