Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1145g00002 ATGAGACTCAGCTGCAACGGCTGCCGCATTCTCCGAAAAGGTTGCACCGATAACTGCACCATCCGCCCTTGCCTCCAGTGGATCCACTCTCCCGAATCTCAGGCCAACGCCACCCTCTTCCTCGCCAAATTCTACGGCCGCGCCGGCCTCCTCAACCTCCTCGACGCCGCCCCGCCCCACCTCCACCCAGCTGTGTTCAAGTCGTTGCTGTACGAGTCTTGTGGGAGGATTGTGAATCCGGTGTACGGCTCGGTGGGTTTGTTCTTGACGGGGGAGTGGGATCGCTGCCAGGCTGCCGTCGATGCGGTCATGATGGGGTCGGACATCAGCGGCGGCTCCGCCGGTGGCGTGGCGGTTTCGGATTCGCATGGGGTTGATCAAGGTTTTGTCGCTGCTTGCGATATACGCCACGTGGCGAGAGAAGGGCAAGCGAACAAGATGAAAGGGAGGGGGCGGTTCAAGAGGAATGGGAAGGTGATAAAGCCAAAGGCGCGAGTGGGTTGGGTGGACTCGTCGGCGCTGTGGAAGCCGGTTCAGGAAATGTCAGAGAGCGACAGCGTCTTCTCCGGGGAGACCGTCGAGGCCAGCTTGGCGAACCGGGATGGAGATCAAGATGCGGACCGAGCCGGAAAAGCTCCGCTTAATCTGAACCTGAGCCTTGGAGAATACTAG 672 0.6027 MRLSCNGCRILRKGCTDNCTIRPCLQWIHSPESQANATLFLAKFYGRAGLLNLLDAAPPHLHPAVFKSLLYESCGRIVNPVYGSVGLFLTGEWDRCQAAVDAVMMGSDISGGSAGGVAVSDSHGVDQGFVAACDIRHVAREGQANKMKGRGRFKRNGKVIKPKARVGWVDSSALWKPVQEMSESDSVFSGETVEASLANRDGDQDADRAGKAPLNLNLSLGEY 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1145g00002 223 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
Pral1145g00002 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 214 - -
Pral1145g00002 223 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1145g00002 Pral-Chr1145 17360 18220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1145g00002 1 159 AS2 family AT1G67100 57.862 6.43e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral1145g00002 LOB 6.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1145g00002 - - pcin:129310290 347.821