Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1138g00003 | ATGGATAAGGGCAAGGACACGGAGGGCGGCGGCGGCGTCCGGTACCGGGGAGTGAGGAGGCGGCCATGGGGGAAGTTCGCGGCGGAGATCCGGGACTCGACGAACCAAGGGCAGAGGGTGTGGCTGGGGACTTTCGACACGGCGGAGGAAGCAGCCAGGGCATATGACAGAGCTGCTTATAACATGAGAGGCTCATTCGCTGTTATCAACTTCCCAAATGAGTATCCTCTCACAGCTGGTCGTTCTTCTAACACAGCAACTTCTTCTTCATCAGCAGCTCCTTCTTCTTCTTCTTCTTCATCTTCGAGGAGCCGCCATGAAGTGTTCGAGTTCGAGTACCTGGATGATAAGCTGCTGGAGGAGCTTCTGGACTGTGAGGAGAAAAAGAATTACAAGGGAAAGTGA | 405 | 0.5457 | MDKGKDTEGGGGVRYRGVRRRPWGKFAAEIRDSTNQGQRVWLGTFDTAEEAARAYDRAAYNMRGSFAVINFPNEYPLTAGRSSNTATSSSSAAPSSSSSSSSRSRHEVFEFEYLDDKLLEELLDCEEKKNYKGK | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1138g00003 | 134 | SUPERFAMILY | DNA-binding domain | 14 | 73 | IPR016177 | GO:0003677 | |
Pral1138g00003 | 134 | Gene3D | AP2/ERF domain | 13 | 73 | IPR036955 | GO:0003700|GO:0006355 | |
Pral1138g00003 | 134 | PANTHER | DNA-BINDING DOMAIN | 14 | 129 | IPR044808 | GO:0003700|GO:0009873 | |
Pral1138g00003 | 134 | SMART | rav1_2 | 14 | 78 | IPR001471 | GO:0003700|GO:0006355 | |
Pral1138g00003 | 134 | PRINTS | Ethylene responsive element binding protein signature | 38 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
Pral1138g00003 | 134 | PRINTS | Ethylene responsive element binding protein signature | 15 | 26 | IPR001471 | GO:0003700|GO:0006355 | |
Pral1138g00003 | 134 | MobiDBLite | consensus disorder prediction | 77 | 106 | - | - | |
Pral1138g00003 | 134 | FunFam | Ethylene-responsive transcription factor 2 | 14 | 73 | - | - | |
Pral1138g00003 | 134 | Pfam | AP2 domain | 14 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Pral1138g00003 | 134 | ProSiteProfiles | AP2/ERF domain profile. | 14 | 72 | IPR001471 | GO:0003700|GO:0006355 | |
Pral1138g00003 | 134 | MobiDBLite | consensus disorder prediction | 77 | 104 | - | - | |
Pral1138g00003 | 134 | CDD | AP2 | 22 | 73 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1138g00003 | Pral-Chr1138 | 32546 | 32950 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1138g00003 | 14 | 129 | AP2-EREBP Transcription Factor Family | AT3G23230 | 64.167 | 2.29e-45 | 142 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral1138g00003 | AP2 | 3.2e-17 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1138g00003 | - | - | pcin:129299756 | 160.229 |