Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1138g00002 ATGGATAAGCACACGGGCAAGACGGAGAAGGGGAAGGAGGAGGTCCACTACAGGGGAGTCCGGAGGCGGCCGTGGGGGAAGTACGCGGCGGAAATAAGGGATCCGTCGAGGCAAGGGGCGAGGCAGTGGCTTGGGACTTTTGATACGGCGGAAGAAGCAGCAAGAGCGTATGACAAAGCTGCCTTTGACATGAGAGGACACCTCGCAATCCTTAATTTCCCCAACGAATACTATGCTCAAGTACGAGGCTCCCCACCATATCCTCCCTATTTAGCATCTTCTTCTTCTTCTCCGGCTTCTTCCTCGTCGTCTTCGTCTTCACCTTTTCATGGTCATGCAAGTGGAAGACAAGTTCTCGAGTTTGAGTGTTTGGATGATCAGGTGCTGCAAGACCTTCTTGAACCAGAAGATCAAAAGAAGAAAAGTGGAGGAGATTGA 438 0.516 MDKHTGKTEKGKEEVHYRGVRRRPWGKYAAEIRDPSRQGARQWLGTFDTAEEAARAYDKAAFDMRGHLAILNFPNEYYAQVRGSPPYPPYLASSSSSPASSSSSSSSPFHGHASGRQVLEFECLDDQVLQDLLEPEDQKKKSGGD 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1138g00002 145 MobiDBLite consensus disorder prediction 84 113 - -
Pral1138g00002 145 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Pral1138g00002 145 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Pral1138g00002 145 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Pral1138g00002 145 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Pral1138g00002 145 MobiDBLite consensus disorder prediction 89 112 - -
Pral1138g00002 145 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Pral1138g00002 145 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Pral1138g00002 145 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Pral1138g00002 145 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Pral1138g00002 145 FunFam Ethylene-responsive transcription factor 2 15 75 - -
Pral1138g00002 145 PANTHER DNA-BINDING DOMAIN 9 137 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1138g00002 Pral-Chr1138 18124 18682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1138g00002 13 140 AP2-EREBP Transcription Factor Family AT3G23230 61.719 7.13e-48 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral1138g00002 AP2 1.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1138g00002 - - aew:130765929 166.777