Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1136g00002 ATGGAAATAGCTAATCAACCAGAGTCAGATATTTACTTGGGACAAATTGTAAATAATGAAGATGAGGCATACGCTTTGTACACAAAATATGCATATCAGTTGGGTTTTTCGAAGATTCGTACAAAAGAATATGTGTGTGCAAAACAAGGGACTAAATATTTGGATGAAGGTACCAGCACTTCATTTACGAAAATGAATGCAAGGACAAATTGTGAAGCTATGGTTCGGTTTACTATTGAAGTGGATGGGTTATGGAAAATAACTAAGTTGATTACTGAACATAATCATGAACTTGTAAAACAAGAGCATAGGCACCTTATGCGTTCTGCTAGGAATATTCCTAGTGCTAAAGGTGACCTCATTAATTCCATGGTGACTACTGGAATCAGAACAAAGGATGTGTGGAGTTATTTAGGTGAAGAAACACATGGATTTGATAATATTGGATTTTCCAAAAAAGATTGTTATAATTATGTCAACAAGCAAAAGTTGAAACTAATAAAAGCTGGGGATGGAAAAAGTTTAGTTAATCTCTTACAAAGTCATCAAGCTGAAGATCCAATGTTTTATTACAGTGTTCAATTTGATGAAGAATTACATTTGACAAATGTTTTCTGGAGGGATGGGAGATCAACAATTGATTATGATTGTTTTGGGGATGTAGTGGTTTTTGACACAACTTATCGTACAAATAAGTATGATTTAATTTGTGGACCTTTTGTTGGAATAAATCATCATTGGCAAAATGTAATGTTTGGTTGTGCCTTTCTGATGAATGAATCAGCAGAGTCCTTTGAATGGTTGTTTGATCAATTTTTAAAATCTATGGGAAATCGACCCCCACAGACTATTGTCACTGATCAAGATGCTGCTATGGCTAAAGCGATTGAAAAGATATTTCCTAATACAAGGCATCGCTTATGCTTATGGCATATATCTAAAAATGCCCCATCTCATTTGGGTTCTCTAAATTGTGATAGTGATTTTCAATCATATTTTCAAAAGTGCATGAGAATGTGTGACTCAGAAGAAGAATTTGAAATCACGTGGGATGAAATGATTAGGAAATTTGAGCTCAATGACCATAAGTGGTTGAATAGAATGTATACAATTCGGCATAAATGGTCAACTGCATTTGGTAAAGACATGTTTTCTGCAAATATAAAATCTTCTCAAAGGAGTGAGAGCACTAATAGTGTTTTGGGAGAAATATCTACAAAAAAAACTTCTCTCACAGAGTTCTTCTTAGCTTTTAAAAAGATGGTAGAAAAATGGAGAAGCTCTGAGGGTGAAGAGGATTTTCACAATAGTCAATCTATTCCTTCATGTGCTATCAATAGGAACAGGACTTTATGCCATGCATCAAAGATTTATACTAAAAAAATTTTCAAATTGTTTGAGAGGGAATATTTGGATGGAGTAGGGACTTTGTTTAAAGAAATTAAAAGAGATGGAGACATCTTCTATTATGAGCTGTGGGTGGATGGAAAAGAGTCAAAGAGGTGGGTTGTGCAATTTAATTCCTCAAATGAGAATGTTACTTGCAGTTGCAAAAAATTTGAATCTATGGGTATTCTTTGTGCTCATGCATTGAGAGTTTATAACATCAAGTGTGTAACAAGGGTGCCAGATAAATACTTCTTAAAGCGATGGTCAAAAAATGCAAAGTTTTCTGATTGTGAGCATAAAGAAAAATATGCAACTAGTGAAGATCCAAAAATTGTGTATCGCAATTCTATTATGCGTTCTTTTTATAACCTTGTGTTGGCCTCACAAGACCACAAGGAAACTCAAGATATCATGTGGGATGTTATCAACAATGGATCTCAACAAGTTCAAGAACGTCTACGTGATTTGAATAAAAGCAACAATGTGGAAAAGAATAAAGAAATCCATTGCACCATTCAAGATGCATCTCAAGTAGGCCAAATTCTTGATCCCCCAAAAGCAAAGCCAAAAGGGGGTGGAAGTGAAAAACAAAAAGGAGTGGAACATGCTGCTTCAACTGCACTAGAGCAAATTTCAATTTCCCAAAGCTTTGATTACACATATCCAATGGTCAATACTACTCAAGTTGTTCAGAGTAGTCATTCTATGATCCCACATGCTTTTTATGGTACTTGGAACATTAGAAGTCCATTTCATATCATTGACATAAGCAACAATTTAAATCAGGAAGCACATCCATCGGCTTGGAGACCACCAACTACGTTTACAGAAAACCAATAG 2229 0.3495 MEIANQPESDIYLGQIVNNEDEAYALYTKYAYQLGFSKIRTKEYVCAKQGTKYLDEGTSTSFTKMNARTNCEAMVRFTIEVDGLWKITKLITEHNHELVKQEHRHLMRSARNIPSAKGDLINSMVTTGIRTKDVWSYLGEETHGFDNIGFSKKDCYNYVNKQKLKLIKAGDGKSLVNLLQSHQAEDPMFYYSVQFDEELHLTNVFWRDGRSTIDYDCFGDVVVFDTTYRTNKYDLICGPFVGINHHWQNVMFGCAFLMNESAESFEWLFDQFLKSMGNRPPQTIVTDQDAAMAKAIEKIFPNTRHRLCLWHISKNAPSHLGSLNCDSDFQSYFQKCMRMCDSEEEFEITWDEMIRKFELNDHKWLNRMYTIRHKWSTAFGKDMFSANIKSSQRSESTNSVLGEISTKKTSLTEFFLAFKKMVEKWRSSEGEEDFHNSQSIPSCAINRNRTLCHASKIYTKKIFKLFEREYLDGVGTLFKEIKRDGDIFYYELWVDGKESKRWVVQFNSSNENVTCSCKKFESMGILCAHALRVYNIKCVTRVPDKYFLKRWSKNAKFSDCEHKEKYATSEDPKIVYRNSIMRSFYNLVLASQDHKETQDIMWDVINNGSQQVQERLRDLNKSNNVEKNKEIHCTIQDASQVGQILDPPKAKPKGGGSEKQKGVEHAASTALEQISISQSFDYTYPMVNTTQVVQSSHSMIPHAFYGTWNIRSPFHIIDISNNLNQEAHPSAWRPPTTFTENQ 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1136g00002 742 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 612 IPR031052 GO:0006355
Pral1136g00002 742 MobiDBLite consensus disorder prediction 644 664 - -
Pral1136g00002 742 Pfam FAR1 DNA-binding domain 38 99 IPR004330 -
Pral1136g00002 742 ProSiteProfiles Zinc finger SWIM-type profile. 502 538 IPR007527 GO:0008270
Pral1136g00002 742 Pfam SWIM zinc finger 508 535 IPR007527 GO:0008270
Pral1136g00002 742 Pfam MULE transposase domain 221 315 IPR018289 -
Pral1136g00002 742 SMART 26again6 513 540 IPR006564 GO:0008270
Pral1136g00002 742 Coils Coil 609 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1136g00002 Pral-Chr1136 27212 29775 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral1136g00002 MULE 1.4e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1136g00002 - - tpra:123905334 740.725