LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1132g00071	ATGGAAGGAGGTTTAGGCCAAAACTCTGTTCCTTCATCAAGTTCTTCTGACAAGTCCATGATTTTGGATGTTAAACCTCTGCGTTGCTTGCTACCAATTTTCCCGATGTCATCTCAAGGTCCTTCTTCTGGCCAGTATCCTTCTGGGTTTGCTCCTTTCTTCCCCTTTGGTGGACCTCAAGAATCTCATGCATGGACTGATCTTAACCAGCATGCTCCTCCTTCTGGAGATGTTCCGATGCCTACTCCAATCCGAACAGTCAGAAGCCCTTTAGATTCTATTCCATCAAAACGTGGAGCACCGCATGGGAGCAGCTCAAAATCATCCCAAAGAAAGACTAAGAAGAGCCAAGAATCACAAATGGATTTATGTTCTATAGTTGGTATTAGCCCTGACCAGCAAACTGATGGTGACCGGGAAGTGGTTAATCTTGTGCTCAGGGAGTTTGATGCGCTTCGAAGAAGAATTAGCCAACTTGAAGATGCCAAGCGTGGAGATTTAAGAGCTGGCAATATATTGATGACCGAAGGCGTTCGAACAAACATGACGAAGAGAGTAGGTGTCGTTCCTGGGATTGAGATTGGGGACATTTTCTATTTCAGAATGGAATTATGTGTTGTGGGGCTACATGCTCAGTCCATGGGTGGAATTGACTCCATGACCATCAAGGGTGGGTTTGAGGATGAACCTTTGGCTTTAAGTATTGTCTCATCATATGAATATGATGACCATGCAGATGATGATGATGTTTTAATTTATAGTGGACAGAGTGGGAACTTTGGCAAGAGAGACACGGTGGCGGCTGATCAGAAGCTTCAAGGGGGCAATCTTGCTCTGGAAAGGAGTTCACGACGGCACAATGAAGTGAGAGTCATCCGGGGCATGAAAGATCCTGCTGCTCCAAATGCAAAAATCTATGTCTATGATGGTCTGTACAAAATTCAAGATTCATGGATAGAAAAGGGGAAACATGGCAGTGGTGTATTCAAGTACAAGTTGGTGAGAGTGCCCGGACAGCTTAGTGCTTTTTCTGTTTGGAAATCAGTTCAAAAGTGGAAGACAGACTGTTCTTCAAGGACTGGACTTATTCTTTCAGATCTGTCTTCAGGAGCTGAGAGTATTCCAGTATCACTTGTCAATGATGTTGATCATGAGAGATTGCCTGGTGGTTTCACTTATTTTCATTCCCTTAGATATTCTAAACCATTCAGCTTAATGCAGTCTTCTGATGGCTGCAACTGTACAAAAACATGTGTCCCTGGTGATCTGAATTGCTCTTGTATTCGGAGAAATGAAGGCGACTTTCCATATATTGGCAATGGCATTCTAGTAAGTCGTAAGCCATTAATTCATGAATGTGGCCCTACCTGTCGTTGTTTTCCTAACTGCAAAAATCGAGTGTCCCAATTGGGTTTAAGGCACTCCTTGGAAGTATTCAAAACTAGGGACAGAGGATGGGGCCTTCGATCATTGGATCCTATTCGTGCTGGTTCTTTTATTTGTGAATATGCTGGAGAAGTTATTGACAAAGGAAACTTAAATCAAAACGAGGAGCTAGCAATTAAAGATGAGTATGCTTTTAATACTAACCGTATTTATCCTCCATTTAAGTGGAATCATACGCCTCAGTTATTTGAAGGAGTGGATTCAGATGACCCTAGTGAGGATTATGATATTCCATCTCCTCTAGTTATAAGTGCTAAAGAGTTCGGAAATGTGGCTAGATTCATGAATCATAGCTGTTCCCCAAATGTTTTCTGGCAGCCAGTTGTTTATGAAGAAAATAATCAATCCTTCCTTCATATTGCATTTTTCTCTCTCAGACACATTCCACCAATGACAGAGTTGACGTACGATTATGGGGTTTCCCGTTCTGATCATACTGAGGGTAGAGGAATGCCCGGAGGTCGGAAAAAATGCTTATGTGGATCATCAAAGTGCCGAGGTTCTTTTGGTTGA	1959	0.4262	MEGGLGQNSVPSSSSSDKSMILDVKPLRCLLPIFPMSSQGPSSGQYPSGFAPFFPFGGPQESHAWTDLNQHAPPSGDVPMPTPIRTVRSPLDSIPSKRGAPHGSSSKSSQRKTKKSQESQMDLCSIVGISPDQQTDGDREVVNLVLREFDALRRRISQLEDAKRGDLRAGNILMTEGVRTNMTKRVGVVPGIEIGDIFYFRMELCVVGLHAQSMGGIDSMTIKGGFEDEPLALSIVSSYEYDDHADDDDVLIYSGQSGNFGKRDTVAADQKLQGGNLALERSSRRHNEVRVIRGMKDPAAPNAKIYVYDGLYKIQDSWIEKGKHGSGVFKYKLVRVPGQLSAFSVWKSVQKWKTDCSSRTGLILSDLSSGAESIPVSLVNDVDHERLPGGFTYFHSLRYSKPFSLMQSSDGCNCTKTCVPGDLNCSCIRRNEGDFPYIGNGILVSRKPLIHECGPTCRCFPNCKNRVSQLGLRHSLEVFKTRDRGWGLRSLDPIRAGSFICEYAGEVIDKGNLNQNEELAIKDEYAFNTNRIYPPFKWNHTPQLFEGVDSDDPSEDYDIPSPLVISAKEFGNVARFMNHSCSPNVFWQPVVYEENNQSFLHIAFFSLRHIPPMTELTYDYGVSRSDHTEGRGMPGGRKKCLCGSSKCRGSFG	652

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pral1132g00071	652	ProSiteProfiles	SET domain profile.	474	621	IPR001214	GO:0005515
Pral1132g00071	652	Pfam	SAD/SRA domain	186	339	IPR003105	-
Pral1132g00071	652	SMART	set_7	474	627	IPR001214	GO:0005515
Pral1132g00071	652	ProSiteProfiles	Pre-SET domain profile.	410	471	IPR007728	GO:0005634\|GO:0008270\|GO:0034968\|GO:0042054
Pral1132g00071	652	Pfam	Pre-SET motif	368	466	IPR007728	GO:0005634\|GO:0008270\|GO:0034968\|GO:0042054
Pral1132g00071	652	Gene3D	-	170	355	IPR036987	-
Pral1132g00071	652	SMART	G9a_1	182	339	IPR003105	-
Pral1132g00071	652	ProSiteProfiles	Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile.	1	652	IPR025794	GO:0016571
Pral1132g00071	652	Gene3D	SET domain	356	651	IPR046341	-
Pral1132g00071	652	SUPERFAMILY	PUA domain-like	169	357	IPR015947	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1132g00071	Pral-Chr1132	687476	690719	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1132g00071	1	652	Su(var)3-9 homologs	AT1G73100	53.471	0.0	716

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SET	Pral1132g00071		SAD_SRA	8.7e-47	CL0178

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1132g00071	K24405		-	gmx:100812173	872.848

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