Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1132g00047 ATGAGGAAGAAGCTGGATACTCGTTTTCCTGCTGCTCGGATCAAAAAGATAATGCAAGCAGATGAAGATGTTGGGAAGATAGCACTTGCAGTGCCTGTTTTAGTTTCTAAGGCTCTAGAGCTGTTTTTACAAGACCTCTGTGATCGTACATATGAAATAACTCTTCAGAGAGGAGCAAAGACGATGAGTGCGTTGCATTTAAAACATTGTGTACAAAGCTATAACGTCTTTGATTTTCTGAAGGATGTCGTCAGCAGGGTTCCTGACTATGGCCATGGGCATGGGCATGGGCATGGACATAACCATTCTGAGACTGGCGCTGATGATCGGGTCATTCCAAGAAGAAGGAAAGCAGCAAATGATGATCACCATGATAGCGATGACGACTCTAAGAGAAGCAAGATGGTTGAGTTTAGCCAGAGTGGCGGCAGTGGTAGGGGGAGAGGCCGAGGTAGAGGGAGAGGCCGAGGTCGAGGGGCTCGAAATGCTGAACGGGAAAGAGAGGTTCATCAACAAGAGCTTGAAACTGAACCCTGCACTTCTGCGCTGAACAGCAGCAAACATAACCCTGATACAAACGTGGCAATTGATAATGGTTCAGAGACAAAGGAGTTACCGAAAGAGAATAATGCAATTCCTGATGAAGGCACTCAATCTGTCCGTAACATTGATCTGAATGCCAACTTGAATGAAAACGAAGACAAAAATGCTAGCACGGCGGTAACTGATGCCCCTATGCCTGATCCTCCAAAACCTGAGACTAAGCATGAGGAAATCCCTGGCTGGTCTCTTTCGGATATGGACAAGATGGTCATTGACTCTATGCAGCTTGCCAACCTTGGTAGACAGATAGAAGAGGATCAGGAAGATTATGATGAAGAAGGGTGA 888 0.4606 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSALHLKHCVQSYNVFDFLKDVVSRVPDYGHGHGHGHGHNHSETGADDRVIPRRRKAANDDHHDSDDDSKRSKMVEFSQSGGSGRGRGRGRGRGRGRGARNAEREREVHQQELETEPCTSALNSSKHNPDTNVAIDNGSETKELPKENNAIPDEGTQSVRNIDLNANLNENEDKNASTAVTDAPMPDPPKPETKHEEIPGWSLSDMDKMVIDSMQLANLGRQIEEDQEDYDEEG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1132g00047 295 MobiDBLite consensus disorder prediction 157 174 - -
Pral1132g00047 295 MobiDBLite consensus disorder prediction 175 199 - -
Pral1132g00047 295 MobiDBLite consensus disorder prediction 117 135 - -
Pral1132g00047 295 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Pral1132g00047 295 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 122 - -
Pral1132g00047 295 MobiDBLite consensus disorder prediction 117 264 - -
Pral1132g00047 295 FunFam dr1-associated corepressor homolog 1 86 - -
Pral1132g00047 295 MobiDBLite consensus disorder prediction 212 239 - -
Pral1132g00047 295 MobiDBLite consensus disorder prediction 249 263 - -
Pral1132g00047 295 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Pral1132g00047 295 SUPERFAMILY Histone-fold 4 99 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1132g00047 Pral-Chr1132 560692 564871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1132g00047 1 284 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.492 2.84e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral1132g00047 CBFD_NFYB_HMF 2.8e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1132g00047 K21752 - gmx:100810093 367.466