Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1132g00042 ATGGCTTCCGAGAAGCTTGGGTGCTGTGGAAAGTTCCTGGAGAACTCAAAACCCTACTTCGCCATGATCTCTCTGCAGTTTGGTTACGCAGGAATGAACATTATCACAAAGGTTTCTCTTAACCAGGGCATGAGCCACTACGTCCTTGTTGTTTATCGCCATGCTTTTGCCACTGCTGTTATCGCCCCTTTCGCCTTCTTCTTTGAAAGGAAAGCTCAACCAAGGATTACTTTCAGACTTTTCATGCAAATCTTCATACTTGCTCTCCTTGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAATTTACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCTGCAATGACTTTTGTGATGGCAGCATTATGCAGGATGGAAAAGATAAATATGAGAAAGGTGAGATGCCAAGCGAAGATAGTGGGAACGTTAGTGACAGTTGGTGGAGCCATGTTGATGACACTATACAAAGGGCCTATTGTGGATATGGTTTGGACCAAACATCTTCATAATCAGCTTTCTCACAAAACCTCTGCAATCTCTTCTTCTTCTTCTGCAAACTCTACTTCTGATAGAGAATGGTTAATTGGCTCCATCTTCCTCATCATTGCCACTCTTGCTTGGGCCTCCCTCTTTGTTCTTCAAGCCAAAGTTCTGGAGACATACAAGAACCATCAGCTAAGCCTCACATCTCTGGTGTGCTTCATAGGCACTCTTCAGGCCATTGTTGTGACCTTTGTGATGGAACACAACCCTTCTGTGTGGAGAATTGGTTGGGATATGAACTTACTTGCTGCTGCTTATGCTGGGATTGTGACATCAAGCATATCATACTATGTTCAAGGTTTGGTGATCAAGAAGAAAGGACCTGTCTTTGCCACTGCCTTTAGCCCTTTGATGATGATTATTGTCGCCATCATGGGTTCTTTCATCCTTTCTGAACAAATCTATCTCGGAGGGGTGATTGGCTCAATGTTGATAGTGATAGGGTTATACTCAGTCCTATGGGGAAAGCACAAAGAGAGTATGGAGGCCAAAGTGATAATGCTAGAGACACATCAAGAAATTGTAATGCCACCAATATTGCCTCTAAAAGCTCCAAATAATAATAATATTAATAATACTGCTGATTCAAAATCTGAGAATAATCACTCCTGTGTTGTTCTTAGCATGCCTTTGCCTGAATCTCCCATTAAAAACCAACCATTTGACGAGGCAGCAAAAGCTTGA 1245 0.4249 MASEKLGCCGKFLENSKPYFAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAFFFERKAQPRITFRLFMQIFILALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAALCRMEKINMRKVRCQAKIVGTLVTVGGAMLMTLYKGPIVDMVWTKHLHNQLSHKTSAISSSSSANSTSDREWLIGSIFLIIATLAWASLFVLQAKVLETYKNHQLSLTSLVCFIGTLQAIVVTFVMEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILSEQIYLGGVIGSMLIVIGLYSVLWGKHKESMEAKVIMLETHQEIVMPPILPLKAPNNNNINNTADSKSENNHSCVVLSMPLPESPIKNQPFDEAAKA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1132g00042 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 345 - -
Pral1132g00042 414 PANTHER WAT1-RELATED PROTEIN 18 351 IPR030184 GO:0016020|GO:0022857
Pral1132g00042 414 Pfam EamA-like transporter family 201 340 IPR000620 GO:0016020
Pral1132g00042 414 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020
Pral1132g00042 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1132g00042 Pral-Chr1132 529281 531951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1132g00042 1 405 Nodulin-like Gene Family AT5G07050 66.908 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1132g00042 - - gmx:100804390 584.334