Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1132g00035 ATGTCTCGTGTTTCACTTTTGAAGGACCTCAATGAAGGGACCGATAGGTGGAGGATCATAACACGTGTGTTTAGGAAATGGAGTGTTTATCAAAAGTTTGCCCCTGCTGATTTGTTTTGTATCACTATGATATTGGTTGATGAAGAGGGAAATAGAATTCAAGCAAGTGTTCTGAGCAGGCATTTACTTGATCAATTCAGAGATTTTCCAGTTGAAGGGGAAACCTATTTTATTGCTAATTTCATTGTATCTTCCAACAACAATCAGTACAGGGGTACCAATAATCCCTTCAAGATAACCTTTACACAGCAAACCTACATCAAGCCACAAGATGGACCAATTCCGATTAATGCATACTCCTTTACACCTATTGCTGAGGTTTTGAAGTGCACTGAGAGAACCTGTATTGACTACCTGATTGATGTTATTGCCTTTGTGCAATCTATTGGCTTGCTGGAAGAATATAGGAAGGAAAATGACACAAAGCATAAGCTGCGCATGGTTTTAGTTGACAATGAGGAGAATGATATTGAATGTGTCCTTTTTGATGAGTGCTCCACTGATGCATATGCTAATTATTTGGAAAATATGGAGACGCTAGTTGTTGTTGTGATCAATCTTGCTAGGGTTGGTTTTGCTGAAGATGGACGTCCACAGCTGTGCAGTTCATTCAGTGCTACGAGGGTGTTTTTCAACCCGTGCCTACAGGAAGTGAAAGACTTGATTGCAAATGCAAAACAAAATTCTTCTCCCGTGATGACAGCCCTTACCCAACCAATCCCTACTCAGTCAGGACAACCTTCAGCTGATAACATGATGAGGAATAATACAAGAGTTGTCATTTCTGAGATTGGAAACCAGCGCATAGATGCGACATTTATTATTATCTGTGTTATCATGAAACTGGAAACCCGACATGGATGGACATATGATTGCTGCTCTAAATGTGGAAGTAAGCCCAAGATGGAAGATGGGTCATGGTACTGCATGACATGCAAGAAGAAGCCTGAATCAATTGAGCCTAAGCTGAAGGTCCATTACGTTGTTGAGGATGAGTCAGGAAAAACTTCTGTTATATTTTGGGACAAGTTGGCAGTGCAGCTGTTCAACAAAAATGCCACAGAAATGAAAGTTTTACTTCAAAAGGCTCAATGTGAATATGATTTCCCGGATAGCTTGGATGAATTGGTTGGCAAGCGGATGATCCTCAAGTTGAAACTTAATGACTATAACAAGAGGTACCCCTCTTCTAGCATAAGTGTCCTGCAGTATACCATTTGTGAAGACCTTATTGAGCAGTTCATACATGCAGCGATAGAGAATCAGGTGCCTGCTAATGACAACCCAGCTGAGGATGAAGTGTGTAATGATGACGACCCAACTACTGAGCTCAATGAAGTAAGAGGTGAAGATCCCCGTTCCCCAGAGGTGGAAATTTCTATTCCAACCCAAAACATAAATGAGAGTGCCTATGTAGAGGGCAATATTGCATCTCCTGTGCAGTCAGCTCAAGTCGAAATTGATAGTAATGCAGATGATATGACTTTATCACAGTTGAGTGACAGCATGAAGGCTCCCCCAACTAAAGGTAAAAGAAAGGGTTCGGGCAAGAGAGTCGCCGCACTTGAAGTGTCCAAGACTATAAATACTCCCTCCTCATCTGTTCCAGAGGACAGGGTAGTTAAAGTTATCAAGCAAGAGAAGAAGTAG 1710 0.4146 MSRVSLLKDLNEGTDRWRIITRVFRKWSVYQKFAPADLFCITMILVDEEGNRIQASVLSRHLLDQFRDFPVEGETYFIANFIVSSNNNQYRGTNNPFKITFTQQTYIKPQDGPIPINAYSFTPIAEVLKCTERTCIDYLIDVIAFVQSIGLLEEYRKENDTKHKLRMVLVDNEENDIECVLFDECSTDAYANYLENMETLVVVVINLARVGFAEDGRPQLCSSFSATRVFFNPCLQEVKDLIANAKQNSSPVMTALTQPIPTQSGQPSADNMMRNNTRVVISEIGNQRIDATFIIICVIMKLETRHGWTYDCCSKCGSKPKMEDGSWYCMTCKKKPESIEPKLKVHYVVEDESGKTSVIFWDKLAVQLFNKNATEMKVLLQKAQCEYDFPDSLDELVGKRMILKLKLNDYNKRYPSSSISVLQYTICEDLIEQFIHAAIENQVPANDNPAEDEVCNDDDPTTELNEVRGEDPRSPEVEISIPTQNINESAYVEGNIASPVQSAQVEIDSNADDMTLSQLSDSMKAPPTKGKRKGSGKRVAALEVSKTINTPSSSVPEDRVVKVIKQEKK 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1132g00035 569 Gene3D - 262 434 IPR012340 -
Pral1132g00035 569 SUPERFAMILY Nucleic acid-binding proteins 6 110 IPR012340 -
Pral1132g00035 569 Gene3D - 113 253 IPR012340 -
Pral1132g00035 569 CDD RPA1_DBD_A_like 18 105 - -
Pral1132g00035 569 PANTHER OS03G0429900 PROTEIN 5 428 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pral1132g00035 569 MobiDBLite consensus disorder prediction 517 569 - -
Pral1132g00035 569 Pfam Domain of unknown function DUF223 43 130 IPR003871 -
Pral1132g00035 569 Gene3D - 2 109 IPR012340 -
Pral1132g00035 569 MobiDBLite consensus disorder prediction 445 476 - -
Pral1132g00035 569 MobiDBLite consensus disorder prediction 461 475 - -
Pral1132g00035 569 Pfam Replication factor-A C terminal domain 293 408 IPR013955 -
Pral1132g00035 569 SUPERFAMILY Nucleic acid-binding proteins 119 242 IPR012340 -
Pral1132g00035 569 SUPERFAMILY Nucleic acid-binding proteins 277 409 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1132g00035 Pral-Chr1132 394980 400711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1132g00035 3 411 Core DNA Replication Machinery Family AT5G08020 24.541 1.97e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1132g00035 - - pcin:129290097 558.14