Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1132g00034 ATGATATTGGTTGATGAAGAGGGAAATAGAATTCAAGCAAGTGTTCTGAGCAGGCATTTACTTGATCAATTCAGAGATTTTCCAGTTGAAGGGGAAACCTATTTTATTGCTAATTTCATTGTATCTTCCAACAACAATCAGTACAGGGGTACCAATAATCCCTTCAAGATAACCTTTACACAGCAAACCTACATCAAGCCACAAGATGGACCAATTCCGATTAATGCATACTCCTTTACACCTATTGCTGAGGTTTTGAAGTGCACTGAGAGAACCTGTATTGACTACCTGATTGATGTTATTGCCTTTGTGCAATCTATTGGCTTGCTGGAAGAATATAGGAAGGAAAATGACACAAAGCATAAGCTGCGCATGGTTTTAGTTGACAATGAGGAGAATGATATTGAATGTGTCCTTTTTGATGAGTGCTCCACTGATGCATATGCTAATTATTTGGAAAATATGGAGACGCTAGTTGTTGTTGTGATCAATCTTGCTAGGGTTGGTTTTGCTGAAGATGGACGTCCACAGCTGTGCAGTTCATTCAGTGCTACGAGGGTGTTTTTCAACCCGTGCCTACAGGAAGTGAAAGACTTGATTGCAAATGCAAAACAAAATTCTTCTCCCGTGATGACAGCCCTTACCCAACCAATCCCTACTCAGTCAGGACAACCTTCAGCTGATAACATGATGAGGAATAATACAAGAGTTGTCATTTCTGAGATTGGAAACCAGCGCATAGATGCGACATTTATTATTATCTGTGTTATCATGAAACTGGAAACCCGACATGGATGGACATATGATTGCTGCTCTAAATGTGGAAGTAAGCCCAAGATGGAAGATGGGTCATGGTACTGCATGACATGCAAGAAGAAGCCTGAATCAATTGAGCCTAAGCTGAAGGTCCATTACGTTGTTGAGGATGAGTCAGGAAAAACTTCTGTTATATTTTGGGACAAGTTGGCAGTGCAGCTGTTCAACAAAAATGCCACAGAAATGAAAGTTTTACTTCAAAAGGCTCAATGTGAATATGATTTCCCGGATAGCTTGGATGAATTGGTTGGCAAGCGGATGATCCTCAAGTTGAAACTTAATGACTATAACAAGAGGTACCCCTCTTCTAGCATAAGTGTCCTGCAGTATACCATTTGTGAAGACCTTATTGAGCAGTTCATACATGCAGCGATAGAGAATCAGGTGCCTGCTAATGACAACCCAGCTGAGGATGAAGTGTGTAATGATGACGACCCAACTACTGAGCTCAATGAAGTAAGAGGTGAAGATCCCCGTTCCCCAGAGGTGGAAATTTCTATTCCAACCCAAAACATAAATGAGAGTGCCTATGTAGAGGGCAATATTGCATCTCCTGTGCAGTCAGCTCAAGTCGAAATTGATAGTAATGCAGATGATATGACTTTATCACAGTTGAGTGACAGCATGAAGGCTCCCCCAACTAAAGGTAAAAGAAAGGGTTCGGGCAAGAGAGTCGCCGCACTTGAAGTGTCCAAGACTATAAATACTCCCTCCTCATCTGTTCCAGAGGACAGGGTAGTTAAAGTTATCAAGCAAGAGAAGAAGTAG 1584 0.4148 MILVDEEGNRIQASVLSRHLLDQFRDFPVEGETYFIANFIVSSNNNQYRGTNNPFKITFTQQTYIKPQDGPIPINAYSFTPIAEVLKCTERTCIDYLIDVIAFVQSIGLLEEYRKENDTKHKLRMVLVDNEENDIECVLFDECSTDAYANYLENMETLVVVVINLARVGFAEDGRPQLCSSFSATRVFFNPCLQEVKDLIANAKQNSSPVMTALTQPIPTQSGQPSADNMMRNNTRVVISEIGNQRIDATFIIICVIMKLETRHGWTYDCCSKCGSKPKMEDGSWYCMTCKKKPESIEPKLKVHYVVEDESGKTSVIFWDKLAVQLFNKNATEMKVLLQKAQCEYDFPDSLDELVGKRMILKLKLNDYNKRYPSSSISVLQYTICEDLIEQFIHAAIENQVPANDNPAEDEVCNDDDPTTELNEVRGEDPRSPEVEISIPTQNINESAYVEGNIASPVQSAQVEIDSNADDMTLSQLSDSMKAPPTKGKRKGSGKRVAALEVSKTINTPSSSVPEDRVVKVIKQEKK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1132g00034 527 MobiDBLite consensus disorder prediction 403 434 - -
Pral1132g00034 527 Gene3D - 71 211 IPR012340 -
Pral1132g00034 527 SUPERFAMILY Nucleic acid-binding proteins 77 200 IPR012340 -
Pral1132g00034 527 Pfam Domain of unknown function DUF223 1 88 IPR003871 -
Pral1132g00034 527 MobiDBLite consensus disorder prediction 475 527 - -
Pral1132g00034 527 MobiDBLite consensus disorder prediction 419 433 - -
Pral1132g00034 527 SUPERFAMILY Nucleic acid-binding proteins 235 367 IPR012340 -
Pral1132g00034 527 CDD RPA1_DBD_A_like 1 63 - -
Pral1132g00034 527 Gene3D - 1 67 IPR012340 -
Pral1132g00034 527 Gene3D - 220 392 IPR012340 -
Pral1132g00034 527 Pfam Replication factor-A C terminal domain 251 366 IPR013955 -
Pral1132g00034 527 SUPERFAMILY Nucleic acid-binding proteins 1 68 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1132g00034 Pral-Chr1132 394980 400711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1132g00034 3 369 Core DNA Replication Machinery Family AT5G08020 24.173 6.24e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1132g00034 - - pcin:129290097 501.901