Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1132g00032 ATGCGTAGCCAATTCACTCCACGATTCTTCCAACGTCGGAGGGTGTTGATGAATTCTTCCTCTACGAATATATTGACCTCAGACATTGTTCGAAGTATGAGTGTTTTCTGCGTCTACCTCGCAAACTGGGTTCTGTTGTGTTGCTTTGACAATCGTGTTGGAGCAAAACTTCTCTATAGCCTATGTCGTTCGGATGACATAATGTCAGGCATAGCAGAGGACCTCAATGAAGGGACCGATAGGTGGAGGATCATAACACGTGTGTTTAGGAAATGGAGTGTTTATCAAAAGTTTGCCCCTGCTGATTTGTTTTGTATCACTATGATATTGGTTGATGAAGAGGGAAATAGAATTCAAGCAAGTGTTCTGAGCAGGCATTTACTTGATCAATTCAGAGATTTTCCAGTTGAAGGGGAAACCTATTTTATTGCTAATTTCATTGTATCTTCCAACAACAATCAGTACAGGGGTACCAATAATCCCTTCAAGATAACCTTTACACAGCAAACCTACATCAAGCCACAAGATGGACCAATTCCGATTAATGCATACTCCTTTACACCTATTGCTGAGGTTTTGAAGTGCACTGAGAGAACCTGTATTGACTACCTGATTGATGTTATTGCCTTTGTGCAATCTATTGGCTTGCTGGAAGAATATAGGAAGGAAAATGACACAAAGCATAAGCTGCGCATGGTTTTAGTTGACAATGAGGAGAATGATATTGAATGTGTCCTTTTTGATGAGTGCTCCACTGATGCATATGCTAATTATTTGGAAAATATGGAGACGCTAGTTGTTGTTGTGATCAATCTTGCTAGGGTTGGTTTTGCTGAAGATGGACGTCCACAGCTGTGCAGTTCATTCAGTGCTACGAGGGTGTTTTTCAACCCGTGCCTACAGGAAGTGAAAGACTTGATTGCAAATGCAAAACAAAATTCTTCTCCCGTGATGACAGCCCTTACCCAACCAATCCCTACTCAGTCAGGACAACCTTCAGCTGATAACATGATGAGGAATAATACAAGAGTTGTCATTTCTGAGATTGGAAACCAGCGCATAGATGCGACATTTATTATTATCTGTGTTATCATGAAACTGGAAACCCGACATGGATGGACATATGATTGCTGCTCTAAATGTGGAAGTAAGCCCAAGATGGAAGATGGGTCATGGTACTGCATGACATGCAAGAAGAAGCCTGAATCAATTGAGCCTAAGCTGAAGGTCCATTACGTTGTTGAGGATGAGTCAGGAAAAACTTCTGTTATATTTTGGGACAAGTTGGCAGTGCAGCTGTTCAACAAAAATGCCACAGAAATGAAAGTTTTACTTCAAAAGGCTCAATGTGAATATGATTTCCCGGATAGCTTGGATGAATTGGTTGGCAAGCGGATGATCCTCAAGTTGAAACTTAATGACTATAACAAGAGGTACCCCTCTTCTAGCATAAGTGTCCTGCAGTATACCATTTGTGAAGACCTTATTGAGCAGTTCATACATGCAGCGATAGAGAATCAGGTGCCTGCTAATGACAACCCAGCTGAGGATGAAGTGTGTAATGATGACGACCCAACTACTGAGCTCAATGAAGTAAGAGGTGAAGATCCCCGTTCCCCAGAGGTGGAAATTTCTATTCCAACCCAAAACATAAATGAGAGTGCCTATGTAGAGGGCAATATTGCATCTCCTGTGCAGTCAGCTCAAGTCGAAATTGATAGTAATGCAGATGATATGACTTTATCACAGTTGAGTGACAGCATGAAGGCTCCCCCAACTAAAGGTAAAAGAAAGGGTTCGGGCAAGAGAGTCGCCGCACTTGAAGTGTCCAAGACTATAAATACTCCCTCCTCATCTGTTCCAGAGGACAGGGTAGTTAAAGTTATCAAGCAAGAGAAGAAGTAG 1905 0.4184 MRSQFTPRFFQRRRVLMNSSSTNILTSDIVRSMSVFCVYLANWVLLCCFDNRVGAKLLYSLCRSDDIMSGIAEDLNEGTDRWRIITRVFRKWSVYQKFAPADLFCITMILVDEEGNRIQASVLSRHLLDQFRDFPVEGETYFIANFIVSSNNNQYRGTNNPFKITFTQQTYIKPQDGPIPINAYSFTPIAEVLKCTERTCIDYLIDVIAFVQSIGLLEEYRKENDTKHKLRMVLVDNEENDIECVLFDECSTDAYANYLENMETLVVVVINLARVGFAEDGRPQLCSSFSATRVFFNPCLQEVKDLIANAKQNSSPVMTALTQPIPTQSGQPSADNMMRNNTRVVISEIGNQRIDATFIIICVIMKLETRHGWTYDCCSKCGSKPKMEDGSWYCMTCKKKPESIEPKLKVHYVVEDESGKTSVIFWDKLAVQLFNKNATEMKVLLQKAQCEYDFPDSLDELVGKRMILKLKLNDYNKRYPSSSISVLQYTICEDLIEQFIHAAIENQVPANDNPAEDEVCNDDDPTTELNEVRGEDPRSPEVEISIPTQNINESAYVEGNIASPVQSAQVEIDSNADDMTLSQLSDSMKAPPTKGKRKGSGKRVAALEVSKTINTPSSSVPEDRVVKVIKQEKK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1132g00032 634 SUPERFAMILY Nucleic acid-binding proteins 74 175 IPR012340 -
Pral1132g00032 634 SUPERFAMILY Nucleic acid-binding proteins 184 307 IPR012340 -
Pral1132g00032 634 Pfam Domain of unknown function DUF223 108 195 IPR003871 -
Pral1132g00032 634 Gene3D - 178 318 IPR012340 -
Pral1132g00032 634 MobiDBLite consensus disorder prediction 582 634 - -
Pral1132g00032 634 Pfam Replication factor-A C terminal domain 358 473 IPR013955 -
Pral1132g00032 634 MobiDBLite consensus disorder prediction 526 540 - -
Pral1132g00032 634 CDD RPA1_DBD_A_like 83 170 - -
Pral1132g00032 634 PANTHER OS03G0429900 PROTEIN 72 493 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pral1132g00032 634 MobiDBLite consensus disorder prediction 510 541 - -
Pral1132g00032 634 SUPERFAMILY Nucleic acid-binding proteins 342 473 IPR012340 -
Pral1132g00032 634 Gene3D - 72 174 IPR012340 -
Pral1132g00032 634 Gene3D - 327 499 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1132g00032 Pral-Chr1132 394980 401230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1132g00032 75 476 Core DNA Replication Machinery Family AT5G08020 24.242 1.76e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1132g00032 - - pcin:129290097 551.977