Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1132g00031 ATGCGTAGCCAATTCACTCCACGATTCTTCCAACGTCGGAGGGTGTTGATGAATTCTTCCTCTACGAATATATTGACCTCAGACATTGTTCGAAGTATGAGTGTTTTCTGCGTCTACCTCGCAAACTGGGTTCTGTTGTGTTGCTTTGACAATCGTGTTGGAGCAAAACTTCTCTATAGCCTATGTCGTTCGGATGACATAATGTCAGGCATAGCAGAGGGAAATAGAATTCAAGCAAGTGTTCTGAGCAGGCATTTACTTGATCAATTCAGAGATTTTCCAGTTGAAGGGGAAACCTATTTTATTGCTAATTTCATTGTATCTTCCAACAACAATCAGTACAGGGGTACCAATAATCCCTTCAAGATAACCTTTACACAGCAAACCTACATCAAGCCACAAGATGGACCAATTCCGATTAATGCATACTCCTTTACACCTATTGCTGAGGTTTTGAAGTGCACTGAGAGAACCTGTATTGACTACCTGATTGATGTTATTGCCTTTGTGCAATCTATTGGCTTGCTGGAAGAATATAGGAAGGAAAATGACACAAAGCATAAGCTGCGCATGGTTTTAGTTGACAATGAGGAGAATGATATTGAATGTGTCCTTTTTGATGAGTGCTCCACTGATGCATATGCTAATTATTTGGAAAATATGGAGACGCTAGTTGTTGTTGTGATCAATCTTGCTAGGGTTGGTTTTGCTGAAGATGGACGTCCACAGCTGTGCAGTTCATTCAGTGCTACGAGGGTGTTTTTCAACCCGTGCCTACAGGAAGTGAAAGACTTGATTGCAAATGCAAAACAAAATTCTTCTCCCGTGATGACAGCCCTTACCCAACCAATCCCTACTCAGTCAGGACAACCTTCAGCTGATAACATGATGAGGAATAATACAAGAGTTGTCATTTCTGAGATTGGAAACCAGCGCATAGATGCGACATTTATTATTATCTGTGTTATCATGAAACTGGAAACCCGACATGGATGGACATATGATTGCTGCTCTAAATGTGGAAGTAAGCCCAAGATGGAAGATGGGTCATGGTACTGCATGACATGCAAGAAGAAGCCTGAATCAATTGAGCCTAAGCTGAAGGTCCATTACGTTGTTGAGGATGAGTCAGGAAAAACTTCTGTTATATTTTGGGACAAGTTGGCAGTGCAGCTGTTCAACAAAAATGCCACAGAAATGAAAGTTTTACTTCAAAAGGCTCAATGTGAATATGATTTCCCGGATAGCTTGGATGAATTGGTTGGCAAGCGGATGATCCTCAAGTTGAAACTTAATGACTATAACAAGAGGTACCCCTCTTCTAGCATAAGTGTCCTGCAGTATACCATTTGTGAAGACCTTATTGAGCAGTTCATACATGCAGCGATAGAGAATCAGGTGCCTGCTAATGACAACCCAGCTGAGGATGAAGTGTGTAATGATGACGACCCAACTACTGAGCTCAATGAAGTAAGAGGTGAAGATCCCCGTTCCCCAGAGGTGGAAATTTCTATTCCAACCCAAAACATAAATGAGAGTGCCTATGTAGAGGGCAATATTGCATCTCCTGTGCAGTCAGCTCAAGTCGAAATTGATAGTAATGCAGATGATATGACTTTATCACAGTTGAGTGACAGCATGAAGGCTCCCCCAACTAAAGGTAAAAGAAAGGGTTCGGGCAAGAGAGTCGCCGCACTTGAAGTGTCCAAGACTATAAATACTCCCTCCTCATCTGTTCCAGAGGACAGGGTAGTTAAAGTTATCAAGCAAGAGAAGAAGTAG 1782 0.4192 MRSQFTPRFFQRRRVLMNSSSTNILTSDIVRSMSVFCVYLANWVLLCCFDNRVGAKLLYSLCRSDDIMSGIAEGNRIQASVLSRHLLDQFRDFPVEGETYFIANFIVSSNNNQYRGTNNPFKITFTQQTYIKPQDGPIPINAYSFTPIAEVLKCTERTCIDYLIDVIAFVQSIGLLEEYRKENDTKHKLRMVLVDNEENDIECVLFDECSTDAYANYLENMETLVVVVINLARVGFAEDGRPQLCSSFSATRVFFNPCLQEVKDLIANAKQNSSPVMTALTQPIPTQSGQPSADNMMRNNTRVVISEIGNQRIDATFIIICVIMKLETRHGWTYDCCSKCGSKPKMEDGSWYCMTCKKKPESIEPKLKVHYVVEDESGKTSVIFWDKLAVQLFNKNATEMKVLLQKAQCEYDFPDSLDELVGKRMILKLKLNDYNKRYPSSSISVLQYTICEDLIEQFIHAAIENQVPANDNPAEDEVCNDDDPTTELNEVRGEDPRSPEVEISIPTQNINESAYVEGNIASPVQSAQVEIDSNADDMTLSQLSDSMKAPPTKGKRKGSGKRVAALEVSKTINTPSSSVPEDRVVKVIKQEKK 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1132g00031 593 CDD RPA1_DBD_A_like 73 129 - -
Pral1132g00031 593 SUPERFAMILY Nucleic acid-binding proteins 301 432 IPR012340 -
Pral1132g00031 593 Gene3D - 286 458 IPR012340 -
Pral1132g00031 593 MobiDBLite consensus disorder prediction 469 500 - -
Pral1132g00031 593 SUPERFAMILY Nucleic acid-binding proteins 76 134 IPR012340 -
Pral1132g00031 593 Gene3D - 66 133 IPR012340 -
Pral1132g00031 593 MobiDBLite consensus disorder prediction 541 593 - -
Pral1132g00031 593 MobiDBLite consensus disorder prediction 485 499 - -
Pral1132g00031 593 SUPERFAMILY Nucleic acid-binding proteins 143 266 IPR012340 -
Pral1132g00031 593 Pfam Replication factor-A C terminal domain 317 432 IPR013955 -
Pral1132g00031 593 Gene3D - 137 277 IPR012340 -
Pral1132g00031 593 Pfam Domain of unknown function DUF223 73 154 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1132g00031 Pral-Chr1132 394980 401230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1132g00031 39 435 Core DNA Replication Machinery Family AT5G61000 21.667 1.31e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1132g00031 - - pcin:129290097 493.812