Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1132g00025 ATGGCGGAGCTGGTGGCTGGAGCGTTTCTCTCCTCTTTCCTTCAAGTGGCATTTGAGAGATTGGCTTCTCGTGACTTTTTCAACTACTTTCGTGGCAGAAAGCTTGATTATGACTTACTGACAAAATTGCGCATCATCCTTCTTTCCGTGGACAAAATTGTTGAAGATGTAGAGGAAAGGCAATACAGAGACCATCGTGTGAAGCTATGGCTTGATGAGCTGAAAGATGAAGTCTTTAAGGCTCAGGACTTGCTGGACGACATTGCTATTGAGGCATCACGACAGGACCTAGATGCTGAATCGCAAAGTACTACTGTTATCCACAAGGTACGAGGCTTCTTTACTGCTCTTGGTAATCAAAATCAGTTTGACAAAACGATAGAGTCAAGGATCAAAGTGGTGCTAAACAACCTGGAGTATCTTATAAAGCAAAATGAGATATTGGGATTTAGGGAAGGGCCATCTACTGGTATTCAATTGGGAGTGAATGGGAAAGAATACAAAAGATTGCCTTCCACAATTTTGATAGATCAATCCAATATGTATGGTAGAGATGCTGATAAAGAGATGATTGTGAAGATGTTACTATCAGAGAACATGGGTGGGAATCAGTCGCCTTTGGATGTGATTGCCATCATTGGTATGGGTGGGATGGGCAAGACGACCCTCGCACGACATGTCTATGAAGATGTAAGTGTGAAGGATCAGTTTCAACATAGAGTTTGGGTGTGTGTTTCTGAAGACTTTGATGCTCATCAAAGTACAAAAGTAATTCTTGAGTCACTTCAACCTGAAAAGAAGCGATCAGATGATCTTTGCTTATGCTCGCCTAAGAAATTCTTGCTTGTTCTTGATGACGTGTGGAACGAGGACAGTAGAATTTGGGAGGTCTTCCAAGCTCCGTTGAGACAAGTAGCAGCACCACAGAGTAAGATTCTTATCACAACTCGTAATAGAAAGGTGGCAGAAGTCATGTGTTGTACCTACTCGTATCCTTTGAAGCCATTACAAGAAGAAGATTCTTGGAAATTATTTGCAAAACATGCATTTGACAACCAACATGATGACGGAGATCCAAATCTCAAACCGATCGGTAGAAAAATCGTGAACAAGTGTGGAGGATTGCCTTTAGCAATAAAAACACTGGGAAGTTTGTTGCACAGAAAACTCTCTTCTCAGTATTGGGGTAAGATTTTGGAAAGTGAGATTTGGCAATTATCAGAAAATGATAGCAACACTATCCCATCTTTAAGATTAAGCTATCACTATTTACCGTCAAATCTAAAACGTTGTTTTGCATATTGCTCCATCTTTCCTAAAGATTATGACATAGACAAGAATGTCTTAATCCAATTGTGGATGGCAGATGGTTTAATATATCCGACCCAAAGAAGTATGAGTTTTGAAGAAACAGGTGATGAAATTTTCAAAGATCTAGAGTCGAGGTCTTTTTTTGAGCCATCGAAAAGAGGTGGCGATTATTTTGTCATGCATGATCTTTTGAATGATTTAGCAAAATCTATGGCAGGAGAGTTTTTTGTGTGGCTCGATGCTGCTCAGACACAAGATATGTCAACCAAGACTCGCTACTTTTCATATATAAGACGCAAAAGCGATAATGTTGACATTTTTGAGAGAGTTCTAAAATGCCACCAATTACGTAGTTTCATCCAATTTGACAGTCTTAGCATTGGCGATGATGTAATGTCTAGGTTTTGTCGTCTCAAGTACATACGGCAATTATCTTTGAAGGGATCTCAAAATTTGAGAAGCTTGACAGATGGCATTAGCAATTTAAAGCACCTGCATTACTTGGATCTTTCCGATACTTCTGTTATGAAATTGCCAAATTCAATGTGCTCATTGATTAATTTACAAACATTGAAATTAAGAGGCTGTCGTCACTTGACTGAGTTGCCATCAAATTTCTACAAACTCATCAACTTGCGTCATCTTGACTTGGAAGCCTGTGCCATACAGAAGATGCCAAGATGTATGGGAAAGTTCAATCAGCTCCAAACAATGACTATGTTTGTTGTGGCAAAGAAAGGAGGACCAAATATAAAAGAATTAGGAGCCTTTAACCACTTAAGAGGCTCACTTACCATCTCAAATATGGAGCACATAAGTGATCTTACAGATATGAGGGAGGCCAAACTGGACGAAAAGAAATTGGATAAATTGACGTTGTCATATCGGGGAGACAGCTATAGTCCTAAAGAGGCACAATGCCTGGAGCAGGTATTGGAAGCGGTTAAGCCAAATCAGAGTGTGAAAGAGCTCACTATTGAGGGATACAGAGGTACCAAATTTCCAAAGTGGCTTCTTGGTGTTGAAACTTTTTTACCCAAGTTAGTGTCTTTACTTTTGCGCGGTAACAATGATGAGAGCTTATTACCACCACTTGGGCAGCTACCTTTCCTCCAGAAACTCGTGATTGATGGATTTGGCGGAATAAAGGCGATACGTGAAGACTTCTATGGGAATGGCTCCTCAGTTGATCCACCATTTCGTTCCCTCTCATATTTAAAGTTTTCTAATATGAGAAAATGGACAGAATGGGTTTTATTTAAACAAGGTCAAAGTTTCCCATGCCTTGAAGAACTTCATATACATTATTGTTGTGAACTGAAAAATTCTTTGCCTCAACACCTTCCTTGTTTAAAAAAACTAGAAATTAAGGGATGTGGGAGTTTGAAGGCCATGCTTCCCAAGTCCCTTGTCATAGAAAAACTATATTTAGATGACTGTGCGAAGATATCAGTGCAAGACATGCCCAGATGGAGCACCTCAGATTTGCCTCCACCTCTGCATGACCTATACTTATGGCGTTGTCCAGCAATGAAATCTCTACCCCAAGGAGGTATGCTTTCCAGCCTACAACGTCTTTCAATCGATGGGTGTTCAAAGCTCATTGCGCGTGGTAGGGATTGGGGTTTGCATGAGTTGTTGTCTTTGAAACAACTTGAAATTATTGATGAACACATGAAGCGGTTCCCTGAAGAGGAGAGATTGTTGCCGCCCAATCTCCAATCTCTGTCATTCAATTATTGTCGCAAGTTGGAAAGCATATACCCTAAGGGTCTTATGCACCTCCATGCTCTCACTTCCTTATCATTTTTGAATTGCGATTGCGTGAGTTTTGAAGGCATGCCAAAAGATGCTTTACCTCGAACCCTTTCTCAGTTAACTATTAGGTTATGTCCGGTGCTGAAGGGAAGGTGTGAAAAGGAGAAAGGACTAGATTGGCCTAAAATTGCTCATATCCCTAATATAATCATTTTTGACGACTAA 3294 0.4029 MAELVAGAFLSSFLQVAFERLASRDFFNYFRGRKLDYDLLTKLRIILLSVDKIVEDVEERQYRDHRVKLWLDELKDEVFKAQDLLDDIAIEASRQDLDAESQSTTVIHKVRGFFTALGNQNQFDKTIESRIKVVLNNLEYLIKQNEILGFREGPSTGIQLGVNGKEYKRLPSTILIDQSNMYGRDADKEMIVKMLLSENMGGNQSPLDVIAIIGMGGMGKTTLARHVYEDVSVKDQFQHRVWVCVSEDFDAHQSTKVILESLQPEKKRSDDLCLCSPKKFLLVLDDVWNEDSRIWEVFQAPLRQVAAPQSKILITTRNRKVAEVMCCTYSYPLKPLQEEDSWKLFAKHAFDNQHDDGDPNLKPIGRKIVNKCGGLPLAIKTLGSLLHRKLSSQYWGKILESEIWQLSENDSNTIPSLRLSYHYLPSNLKRCFAYCSIFPKDYDIDKNVLIQLWMADGLIYPTQRSMSFEETGDEIFKDLESRSFFEPSKRGGDYFVMHDLLNDLAKSMAGEFFVWLDAAQTQDMSTKTRYFSYIRRKSDNVDIFERVLKCHQLRSFIQFDSLSIGDDVMSRFCRLKYIRQLSLKGSQNLRSLTDGISNLKHLHYLDLSDTSVMKLPNSMCSLINLQTLKLRGCRHLTELPSNFYKLINLRHLDLEACAIQKMPRCMGKFNQLQTMTMFVVAKKGGPNIKELGAFNHLRGSLTISNMEHISDLTDMREAKLDEKKLDKLTLSYRGDSYSPKEAQCLEQVLEAVKPNQSVKELTIEGYRGTKFPKWLLGVETFLPKLVSLLLRGNNDESLLPPLGQLPFLQKLVIDGFGGIKAIREDFYGNGSSVDPPFRSLSYLKFSNMRKWTEWVLFKQGQSFPCLEELHIHYCCELKNSLPQHLPCLKKLEIKGCGSLKAMLPKSLVIEKLYLDDCAKISVQDMPRWSTSDLPPPLHDLYLWRCPAMKSLPQGGMLSSLQRLSIDGCSKLIARGRDWGLHELLSLKQLEIIDEHMKRFPEEERLLPPNLQSLSFNYCRKLESIYPKGLMHLHALTSLSFLNCDCVSFEGMPKDALPRTLSQLTIRLCPVLKGRCEKEKGLDWPKIAHIPNIIIFDD 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1132g00025 1097 Gene3D - 167 330 IPR027417 -
Pral1132g00025 1097 Gene3D - 421 508 IPR036388 -
Pral1132g00025 1097 PRINTS Disease resistance protein signature 372 386 - -
Pral1132g00025 1097 PRINTS Disease resistance protein signature 274 288 - -
Pral1132g00025 1097 PRINTS Disease resistance protein signature 209 224 - -
Pral1132g00025 1097 PRINTS Disease resistance protein signature 597 613 - -
Pral1132g00025 1097 Gene3D Ribonuclease Inhibitor 906 1089 IPR032675 -
Pral1132g00025 1097 Gene3D - 34 123 - -
Pral1132g00025 1097 Gene3D - 335 420 IPR042197 -
Pral1132g00025 1097 Coils Coil 71 91 - -
Pral1132g00025 1097 Pfam Rx N-terminal domain 9 101 IPR041118 -
Pral1132g00025 1097 Gene3D Ribonuclease Inhibitor 536 905 IPR032675 -
Pral1132g00025 1097 SUPERFAMILY L domain-like 494 1087 - -
Pral1132g00025 1097 Pfam NB-ARC domain 190 400 IPR002182 GO:0043531
Pral1132g00025 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 435 IPR027417 -
Pral1132g00025 1097 PANTHER DISEASE RESISTANCE PROTEIN RP 49 876 IPR044974 GO:0006952
Pral1132g00025 1097 FunFam Probable disease resistance protein At1g63360 421 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1132g00025 Pral-Chr1132 294503 297796 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1132g00025 203 746 WRKY Transcription Factor Family AT5G45050 21.782 1.17e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1132g00025 - - pcin:129315551 1207.2