Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1132g00021 ATGGCGGAGTTGGTGGCTGGAGCGTTTCTCTCCTCTTTCCTTCAGGTGGCATTTGAGAGATTGGCTTCTCATGACTTTCTCGACTATTTTCGTGGCAGAAAGCTCGATCATGACTTACTGACAAAATTGCGTGTCATCCTTATTTCTGTGGACAAAATTGTTGAAGATGCAGAGGAAAGGCAATACAGAGACCATCGCGTGAAGCAGTGGCTTGAGGAGCTCAAAGATGAAGTCTTTAAGGCTCAAGACTTGCTAGATGACATAGCTACAGAGGCATCGCGACAGAAGCTGGATGCTGAATCGCAAAGTACTACTGTTATCCGCAAGGTACGAGGCTTCTTTACTCCTCTTGTTAGTCAAAATCAGTTTGACAAAAAGATAGAGTCGGGGATCAAAGAAGTGCTCAGCAACCTAGAGAATCTTATGAAGCAAAATAAGATATTGGGATTAAGAGAAGGGCCATCTGTTGGTAATCAGTCGGGAGTGATGAGCAGGAAAGTATGGAAAAGATTGCCTTCAACACATTTGATAGATGAATCCGAAATATATGGTAGAGATGCTAATAAAGAGAGGATTGTAGAGATTTTATTGTCACAGAACATAGGATGCAGGAATCAATTGCCTATGGATGTGATTGCCGTCACTGGTATGGGCGGGATGGGTAAGACAACCCTTGCACGACTTGTTTATGAAGATCCAAGGATGAAGGATCATTTTCAACATAAAGCTTGGGTGTGTGTTTCTGAAGAATATGATGTTGATCACCTCACAAAAGCAATTCTTGAGTCACTTGACTGTCCAACTAAACAAGATTTTCACGTAAATCAGTCTAAACTAGAAGAGACATTGATGGGCAAGAAATTCTTTCTCGTTCTTGATGATGTCTGGAATCAGAATTGTCAAATTTGGGAGGTTTTCACAGCTCCCTTGAGACAAGTAGCACCCCAGAGTAAGATTCTTATTACAACCCGTAACAAGACGGTAGCAGAAGTCATGTGTTGTGCCTTCACATATCCTTTGAAGCCACTACAAGGTGGAGATTGTTGGAATTTATTTGGAAAATATGCATTTAACAACCAACCTGATGCTGCAGGTCAAGATCTTGTACAAATCGGTAGAGAAATCATAAAGAAATGTGGAGGATTGCCTTTAGCACTAAAAACACTGGGAAGTTTGTTGCATATAAAACTCTCTTTTCAACACTGGAATAAGATTTTGAAAAGTGAGCTTTGGACATTGTCACAAGATCGTTGCAATATTATTCCATCTTTAGGATTGAGTTACCATTATCTACCTTCAAATTTGAAGCATTGTTTTGCATATTGCTCAATCTTTCCCAAAGATTATGACATAGACAAGAATGACCTAATCCAATTATGGATGGCAGATGGTTTAATACATCCAACTCAAAGAAGTACGAGCCTTGAAGAAGCGGGTGATGAAATTTTCAAAGATCTAGAGTCCAGGTCTTTTTTTGAGCCATCAAAAAAAGGTGGCGATTATTTCATCATGCATGATCTTCTAAATGACTTAGCAAAATCCGTGGCAGGAGAGTTTTTTGTGTGTCTTGAGGCTGCTCAAGCACGAGATATGTCAACGAAGACTCGCTACTTTTCATATACAAGATGCAAAAGTGATGATCTTGAGATTTTTGACAAAGTTTTCAAATGCCACCAATTACGCAGTTTCTTCCTATTGGATGTCTTCAATCATAGCATTGGTGATGATATAATGTCCAAGCTTTGTCGTCTCAAGTACATACGACAATTATCTTTGAAGGGATCTCGAAATTTCAGAAACTTGATAGATGGTATCGGCAATTTAAAGCACTTGCATTATTTGGATCTTTCTGGGACTTCAGTTAAGAAATTGCCAAATTCATTGTGCTCGTTGATTAATATACAAACATTGAAATTAAGAGGTTGTGATCGTTTGACTAAGTTGCCATCAAATTTCTATAAACTCATTAACTTGCGTCATCTTGACTTGGAAGATTGTGCCATAAGGAAGATGCCCAAATATATGGGAAAGTTAAATCAGCTCCAAACAATGAATAACTTTGTTGTGGCAAAGAAAGGAGGATCAAATATAAAAGAATTAGGAGCCTTGAACCACTTAACAGGCTCACTAGCCATCTCGAATATGGAGGACATAAGTGATCCTGCAGATATGAGGGAGGCCAATTTGAAAGAAAAGAAATTGAATAAATTGATGTTGTGGTATCGGCAAAATAGCTATAGTCTTGAAGAGGCACAACGCCAGGAGCACATATTGGAAGCTATTGAACCAAATCAGAGTGTGAAAGAGCTCGCTGTTTATGTATACAAAGGTAACAAATTTCCAAAGTGGCTTCTTGGTGTTGCACATTTTCTACCCAATTTAGTGTCTTTATCTTTACAGAGTTGCTTCTATTGTGTGAGCTTACCACCACTTGGCCAACTAACTTCCCTCCAGCAACTCTTGATTGGAAGAATTGATGGAGTAAAGGTGATAGGTGAAGAGTTCTATGGGAATGGCTCCTTAATTGCTCAACCATTTCCTTCCCTCTTATATTTGAACTTTTTTGGTATGAGAGAATGGGAAGAATGGGATACATGTTATGAGGGTGAAAGTTTTCCACGCCTTAAACAGCTTTGTATACACGGATGTCCTAGACTGACAAAGTCTTTGCCTCAACACCTTCCTTGTCTAAAAACACTAGACATTTTGGAATGTGGGAATTTGGAGGCCACGCTTCCCAAGTCCTCTTCCATGGAGAAGCTACATTTACAAGATTGTAAGAAGATATCAGCAAAAGACATGCCCACATGGAGCATCTCAGACGTACTTCCACCTCTCCATGACTTGTCTTTATGGCATTGTCCAGCAATGGAATCTCTTCCCCATGGAGGTATGCTTTCCAACCTACAACGTCTTTCAATCAGTTGGTGTTCCAAGCTCATTGCGTGTGGTGGGGATGGGGGTTTGCATGAGTTGTTGTCTTTGAAACAACTTGATATTACTGATGACGTCATGGAGTGGTTCCCTGAAGAAGAGGGATTGTTGCCGCCCAATCTCCAATCTCTTTCATTCTTGCATTGTACCAATTTGAGAAGAATAAACCATAGGGGTCTTGTGCACCTCCGTTCTCTCACTTCCTTATCATTTTACTATTGCCCTCGCATGAGTTATGAAGGCATGCCAGGAGAAGATGCTTTACCTCCATCCCTTTCTCGCGTAACTATTAATGGTGAATGTTGTTTGCTTAAGGAGAGTTGTGAAGAGGAGGAAGGACCCGATTGGACTAAAATTGCTCACATCCTTCATATGACCATTTGCTGA 3321 0.4011 MAELVAGAFLSSFLQVAFERLASHDFLDYFRGRKLDHDLLTKLRVILISVDKIVEDAEERQYRDHRVKQWLEELKDEVFKAQDLLDDIATEASRQKLDAESQSTTVIRKVRGFFTPLVSQNQFDKKIESGIKEVLSNLENLMKQNKILGLREGPSVGNQSGVMSRKVWKRLPSTHLIDESEIYGRDANKERIVEILLSQNIGCRNQLPMDVIAVTGMGGMGKTTLARLVYEDPRMKDHFQHKAWVCVSEEYDVDHLTKAILESLDCPTKQDFHVNQSKLEETLMGKKFFLVLDDVWNQNCQIWEVFTAPLRQVAPQSKILITTRNKTVAEVMCCAFTYPLKPLQGGDCWNLFGKYAFNNQPDAAGQDLVQIGREIIKKCGGLPLALKTLGSLLHIKLSFQHWNKILKSELWTLSQDRCNIIPSLGLSYHYLPSNLKHCFAYCSIFPKDYDIDKNDLIQLWMADGLIHPTQRSTSLEEAGDEIFKDLESRSFFEPSKKGGDYFIMHDLLNDLAKSVAGEFFVCLEAAQARDMSTKTRYFSYTRCKSDDLEIFDKVFKCHQLRSFFLLDVFNHSIGDDIMSKLCRLKYIRQLSLKGSRNFRNLIDGIGNLKHLHYLDLSGTSVKKLPNSLCSLINIQTLKLRGCDRLTKLPSNFYKLINLRHLDLEDCAIRKMPKYMGKLNQLQTMNNFVVAKKGGSNIKELGALNHLTGSLAISNMEDISDPADMREANLKEKKLNKLMLWYRQNSYSLEEAQRQEHILEAIEPNQSVKELAVYVYKGNKFPKWLLGVAHFLPNLVSLSLQSCFYCVSLPPLGQLTSLQQLLIGRIDGVKVIGEEFYGNGSLIAQPFPSLLYLNFFGMREWEEWDTCYEGESFPRLKQLCIHGCPRLTKSLPQHLPCLKTLDILECGNLEATLPKSSSMEKLHLQDCKKISAKDMPTWSISDVLPPLHDLSLWHCPAMESLPHGGMLSNLQRLSISWCSKLIACGGDGGLHELLSLKQLDITDDVMEWFPEEEGLLPPNLQSLSFLHCTNLRRINHRGLVHLRSLTSLSFYYCPRMSYEGMPGEDALPPSLSRVTINGECCLLKESCEEEEGPDWTKIAHILHMTIC 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1132g00021 1106 SUPERFAMILY RNI-like 845 1076 - -
Pral1132g00021 1106 Gene3D - 343 427 IPR042197 -
Pral1132g00021 1106 Gene3D - 163 336 IPR027417 -
Pral1132g00021 1106 Gene3D - 428 515 IPR036388 -
Pral1132g00021 1106 Pfam Rx N-terminal domain 9 101 IPR041118 -
Pral1132g00021 1106 Pfam NB-ARC domain 206 407 IPR002182 GO:0043531
Pral1132g00021 1106 Gene3D Ribonuclease Inhibitor 963 1077 IPR032675 -
Pral1132g00021 1106 FunFam Probable disease resistance protein At1g63360 428 514 - -
Pral1132g00021 1106 Gene3D Ribonuclease Inhibitor 548 927 IPR032675 -
Pral1132g00021 1106 Coils Coil 71 91 - -
Pral1132g00021 1106 Gene3D - 30 123 - -
Pral1132g00021 1106 PANTHER DISEASE RESISTANCE PROTEIN RP 49 877 IPR044974 GO:0006952
Pral1132g00021 1106 PRINTS Disease resistance protein signature 379 393 - -
Pral1132g00021 1106 PRINTS Disease resistance protein signature 892 908 - -
Pral1132g00021 1106 PRINTS Disease resistance protein signature 282 296 - -
Pral1132g00021 1106 PRINTS Disease resistance protein signature 211 226 - -
Pral1132g00021 1106 SUPERFAMILY L domain-like 504 908 - -
Pral1132g00021 1106 FunFam Probable disease resistance protein At1g61300 169 335 - -
Pral1132g00021 1106 SMART LRR_typ_2 608 631 IPR003591 -
Pral1132g00021 1106 SMART LRR_typ_2 655 678 IPR003591 -
Pral1132g00021 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 442 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1132g00021 Pral-Chr1132 206662 209982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1132g00021 205 390 WRKY Transcription Factor Family AT5G45050 30.151 6.56e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1132g00021 - - pcin:129315551 1253.81