Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1132g00002 ATGGCCTCCAGGATTAATCAAGAACCCGAAGCTTACAGAGTTGAGGAACAAATTGATGAAGAAGAAGAAGACGGCGAGGGGGAGTCAGAAGGTTGGGATGACTGGAACGGGGATGAGGATGAGGGAGGAGAGGGAGGCTCAGAATCGGATTTTCTCTGTCTCTTCTGCGATTCCAAGTATAGTTCGTGCGATTCCTTGTTTGAGCACTGCGCCAAAGTCCACTACTTTGATTTTCCTTGCATTAGGAAAGCTCTTAGCTTGGATTTTTATGGCTCTTTCAAGCTCATTAATTACATACGCTCACAGGTCGCGGATAACAAATGTTGGTGTTGTGGATTGACGTTCCAGTCCAACAAAGATTTGCAGAATCATTTGCATGACACAGTAAACTTGAAGGATATTAAGTGTCTATGGGATGATGAGAGATATCTAAAGCCTTTCATACAAGATGATTCGTTGCTGTACAGTTTTGATGAATCTGAAGAAATTGAAGATGAGCAGTTTCCACCAATTAATGAGGAGGAACTAGTGGGGGATTTGAAGAACTCTGAAGAGATTTGTGGTGGTGATCAGAATACTGTGGAAAAGATGGTACTTAATGCTGATGACTATGATATGTCTAGAGTTAAGGGAACTACTATTTCTGTTAATGATATTAACAGTCCTAGTTCATCAGACAAGGATCTTATTAATGATAAGGACTCAAGAGGTTTTGTTTCATCAAATGACAAAAGTCAAGAAGGACATTTGATCTCTAACTCTTCAAGTCGTCTTGCAAAGCACATCATGAAGGTTAATGAAAATTATTTTGGAGCTTATAGTTCATTTGGCATTCATCGTGAGATGCTCAGTGATAAGGTAAGAATGGATGCATATGGGAAAGCTATTTTGAAGAACCCCTCTCTCCTAAAGGGTGCTGTAGTCATGGATGTAGGTTGCGGAACTGGAATCCTCAGCCTATTTGCAGCTCAAGCAGGCGCGTCAAGGGTGATTGCAATTGAGGCTAGTGCCAAGATGGCAGCAGTGGCGACTAAGGTTGCAAATGATAATGGTCTTTTGCATTGTAAAAACCAAAGTCAAGCCGATGGCCACCAGAAGGGAGTAATGGAAGTGGTCCAGGGTATGGTTGAAGAGGTTGATAAAAACGCTGAACTTCAACCTCACAGCGTTGATGTATTGTTAAGTGAATGGATGGGATATTGCCTGCTGTATGAGTCTATGCTTAGCTCAGTCCTCTATGCAAGGGACCGATGGTTGAAGCCTGGAGGGGCCATTCTTCCTGATACAGCGACCGTTTTTGTTGCGGGTTTTGGAAAAGGGGGTACAAGTCTTCCTTTTTGGGAAAACGTGCATGGTTTTGACATGTCTTCCATTGGCAAGGAGTTGGTGAACGATGCTGCGCAATTTCCAATAGTTGATGTTTTGGACTGTGAAGATTTGGTCACCAGTTCTGTGATTCTTCAGACTTTTGACTTGGCAACTATGAAGCCTAATGAAGTGGATTTCACTGCAACTGCTACTTTGGAGCCAATGTCAAATGCCAGCAACACAAAACATTTAGATTCAAAAACAGGATGCTGCAGCTGTTATGGAGTTGTCCTGTGGTTTGAAACTGGATTTACAAGCAGGTTCTGCCGAGAAGCACCGGCTGTGTTGTCAACATCTCCGTACACGCCAAAAACACATTGGTCGCAAACAATCTTAACCTTCCGGGAACCCATTGCTATGAGATCTGAGAAAGCTACTGGAGGTAAAGTTGCAGCAATTGGTACTGAAGTTTACCCAGCTGCAAAGATTGATTTGCGCATTAGTATTGTCCGATCTACAGAGCACCGCAGCATTGACATTTCCTTAGAAGCTGTTGGGGTCGGCCCTGATGGTCGGAGACGCAGTTGGCCTGCACAACTCTTTAGTCTGCAGTAG 1923 0.4342 MASRINQEPEAYRVEEQIDEEEEDGEGESEGWDDWNGDEDEGGEGGSESDFLCLFCDSKYSSCDSLFEHCAKVHYFDFPCIRKALSLDFYGSFKLINYIRSQVADNKCWCCGLTFQSNKDLQNHLHDTVNLKDIKCLWDDERYLKPFIQDDSLLYSFDESEEIEDEQFPPINEEELVGDLKNSEEICGGDQNTVEKMVLNADDYDMSRVKGTTISVNDINSPSSSDKDLINDKDSRGFVSSNDKSQEGHLISNSSSRLAKHIMKVNENYFGAYSSFGIHREMLSDKVRMDAYGKAILKNPSLLKGAVVMDVGCGTGILSLFAAQAGASRVIAIEASAKMAAVATKVANDNGLLHCKNQSQADGHQKGVMEVVQGMVEEVDKNAELQPHSVDVLLSEWMGYCLLYESMLSSVLYARDRWLKPGGAILPDTATVFVAGFGKGGTSLPFWENVHGFDMSSIGKELVNDAAQFPIVDVLDCEDLVTSSVILQTFDLATMKPNEVDFTATATLEPMSNASNTKHLDSKTGCCSCYGVVLWFETGFTSRFCREAPAVLSTSPYTPKTHWSQTILTFREPIAMRSEKATGGKVAAIGTEVYPAAKIDLRISIVRSTEHRSIDISLEAVGVGPDGRRRSWPAQLFSLQ 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1132g00002 640 ProSitePatterns Zinc finger C2H2 type domain signature. 53 74 IPR013087 -
Pral1132g00002 640 Gene3D Vaccinia Virus protein VP39 258 427 IPR029063 -
Pral1132g00002 640 CDD AdoMet_MTases 308 426 - -
Pral1132g00002 640 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 54 620 IPR025799 GO:0016274|GO:0018216
Pral1132g00002 640 Gene3D - 430 631 - -
Pral1132g00002 640 MobiDBLite consensus disorder prediction 14 45 - -
Pral1132g00002 640 SUPERFAMILY beta-beta-alpha zinc fingers 28 162 IPR036236 -
Pral1132g00002 640 Pfam Methyltransferase domain 308 423 IPR041698 -
Pral1132g00002 640 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 266 608 IPR025799 GO:0016274|GO:0018216
Pral1132g00002 640 MobiDBLite consensus disorder prediction 1 45 - -
Pral1132g00002 640 FunFam Protein arginine N-methyltransferase 6 262 427 - -
Pral1132g00002 640 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 273 583 IPR029063 -
Pral1132g00002 640 MobiDBLite consensus disorder prediction 215 251 - -
Pral1132g00002 640 Pfam C2H2 type zinc-finger (2 copies) 53 127 IPR041661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1132g00002 Pral-Chr1132 23456 27707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1132g00002 20 639 C2H2 Transcription Factor Family AT3G12270 55.924 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1132g00002 K11436 - gmx:100778113 825.083