Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1131g00018 ATGGGGAAAGCAAAGATTGCGATAAAGAGGATAGACGATTCAGCAAACAGGCAAGTGACTTTCTCAAAGAGAAGAACTGGGTTGCTCAAGAAAGCAAGAGAGCTTGGGATCCTCTGTGACGCACAAGTTGGGGTCATCTTCTTCTCCAGCACCGGCAAGCTCTATGAATATGGAAGCTCCAGCTTGAAGTCAATTATTGACCGCTACAATAAACACAAAGATGAGGAACAACATCCGCTTATGAATCCAGCTTCAGAAGCCAAGTTTTGGCGGAGAGAAGCAACGGTCTTGAAGCAACAACTGCAACACTTGCAGGAATTGCACAGGCAATTCATGGGTGAACAGATTTCTGGTCTGGGAATCATCGAGTTGAAAACTTTGGAAAATCAACTGGAGATGAGTTTAAAAAATGTCCAGATCAAGAAGGAGCAAATTTTAGCTGACAAGATTAAAGAGTTACAACACAAGATTACAGCTGCTTTGGCACAACCTCTTTGA 498 0.4297 MGKAKIAIKRIDDSANRQVTFSKRRTGLLKKARELGILCDAQVGVIFFSSTGKLYEYGSSSLKSIIDRYNKHKDEEQHPLMNPASEAKFWRREATVLKQQLQHLQELHRQFMGEQISGLGIIELKTLENQLEMSLKNVQIKKEQILADKIKELQHKITAALAQPL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1131g00018 165 Coils Coil 87 107 - -
Pral1131g00018 165 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Pral1131g00018 165 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Pral1131g00018 165 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Pral1131g00018 165 Gene3D - 13 95 IPR036879 GO:0003677|GO:0046983
Pral1131g00018 165 SUPERFAMILY SRF-like 2 81 IPR036879 GO:0003677|GO:0046983
Pral1131g00018 165 CDD MADS_MEF2_like 2 74 IPR033896 GO:0000977|GO:0045944
Pral1131g00018 165 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Pral1131g00018 165 Pfam K-box region 85 158 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pral1131g00018 165 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Pral1131g00018 165 PANTHER SERUM RESPONSE FACTOR HOMOLOG 4 151 - -
Pral1131g00018 165 Coils Coil 124 144 - -
Pral1131g00018 165 ProSiteProfiles K-box domain profile. 87 165 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pral1131g00018 165 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1131g00018 Pral-Chr1131 172590 190184 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1131g00018 1 157 MADS-box Gene Family AT4G37940 61.146 5.78e-68 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Pral1131g00018 K-box 8.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1131g00018 K09264 - zju:112492935 217.238