Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1125g00004 ATGTGTTCAGGAAGGACCCTAGTTCTGTTCTTTCTCTCCTGCTTCTTGGACCCAACCGGCGTGTTGGCGCAAAACCTCACCTTCGAATTCTCTTCCTTCACGTCTCTTCGGAACGTCACCCTCGTCGGCGATTCCTTTCTCCGGAATGGCGTCGTCGGCCTCACGAGATCGTCCGACGTGCCCACGTCCAGTGCCGGAGCCGTAATCTACAATGACCGCATTTCTCTCTTCGACCCACACTCAAACGCTTCCTCTTCATTCTCAACATCATTCGCTTTCTCTATCACTGACAACCTTAACAATCCTCCTTCTCTCGTGGATGGTTCCTTATCATTCTTTCTATTTCCCAGCAACCACACTCTTTGGAGCATCGGCGGAAAGATGGGTCTCCTGAATTCCTCCCAGTTGACCCGATCCAACGTCGTTGCCGTCGAATTCGTCCCCAGTGATAATCGCGTTGAGTTGGGTTTAAACGGCGTTGCTTCTATCAATACCACCGGGGATACCATCTCTCAGGGCATTGATCTCAAGAGTGGGGAATTGATCACAGCTTGGATTGATTACGAGAGTGAAAAGAGGAAGCTTCAGGTGTTTTTGAGTTATAATAATTCGACTTCAAACTTCAAGCCTGAGAACCCGGTTCTGAATGTTGATGATCTTGACCTCTCTGGGTATATCAAGGAGATAGTGTACGTGGGATTTGCTGCTTCCGCCGAGGGAAGCACTGAGCTTCATCAGCTTGTGAACTGGAGATTCCAGAGTAATGGATCTCTTCCTGCAACACCACCAAAGTTCCATGCTCATAACGTCTCTGGTAGCTGGGTGAGTGCAACCGTGGACATTCATAATAAGTCCTATAATCATTCCAGCAACAAGCATGATAAGAGGCTTGGATTAGGTATAGCCATTGCTGGTCCAGCTTTTTTCTGTGTAGTCTTGGTAAGTTTGGGCTATTTTTCTGTACGCAAATGGAGGAATGGCAGAACATTGAAGAGGGTGAAAACTGATTTAATGTCTTGTCCTAGGGAATTTAGTTACAAAGAATTGAAAGTGGCCACAAAAGGGTTTCACTCGAGTAGGATCATAGGCCAAGGATCATTTGGAACAGTATATAAAGCCTTGTTTCTACCTTCAGGAGCCATTGCTGCTGTGAAGAGGTCAAGACAATCTCATGATGGCAAAACAGAATTTCTAGCTGAACTGTCCATCATAGCAGGTTTGAGGCACAAGAATTTGGTTCAGCTCCAAGGTTGGTGTGTTGACAAGGGGGAATTGTTGCTTGTGTATGACTTCATGCCCAATGGAAGCTTAGATAAGATGCTCTACCCAGAATCCGAAGGAAGCCAGAACTTGTTGAACTGGTCTCGTAGACTTAATATTGCCATTGGGTTGGCTTCTGTTCTGACTTACCTCCACAAAGAATGTGAAAAAAGAGTCATTCACAGAGACATTAAGACCGGAAACATATTGTTAGACGCAAATTACAACCCAAGGTTGGGGGATTTCGGATTGGCGAAGCTGATGGATCATGACCGAAGCCCAGTTTCAACATTAACAGCAGGAACAATGGGGTATCTGGCGCCTGAGTATCTTCAATATGGAATGGCGACTGAGAAAACTGATGTTTTTAGCTATGGTGTGGTTGTTCTCGAAGTGGCATGTGGGAGGAGGCCAATTGAAAGAGAAGGCCAAAACATGGTCAATTTGGTTGATTGGGTATGGGGTTTTCACTCTCAAGGGAAGATAGTTGAAGCAGCAGATAAAAGGTTGAATGGGGAGTTTACAGAGAAAGAGATGAAGAAACTTTTGCTCTTGGGGTTGAGCTGTGCAAACCCAGATAGTGCTGAAAGGCCTTCTATGACCAGGGTTTTGCAGATTCTCAGCAACGATGAACCAGCAAGCACACTTGTTGTGCCAAAGGTGAAACCATGCCTCACCTTCTCTTGTGGCCTACCTTTGAGTCTCGATGAGATTGTTTCAGATAGTGACGTGGAGTCCAGTACTGAGAAATCCTTGTGTGAGATAAGAATTGGCTGA 2037 0.4585 MCSGRTLVLFFLSCFLDPTGVLAQNLTFEFSSFTSLRNVTLVGDSFLRNGVVGLTRSSDVPTSSAGAVIYNDRISLFDPHSNASSSFSTSFAFSITDNLNNPPSLVDGSLSFFLFPSNHTLWSIGGKMGLLNSSQLTRSNVVAVEFVPSDNRVELGLNGVASINTTGDTISQGIDLKSGELITAWIDYESEKRKLQVFLSYNNSTSNFKPENPVLNVDDLDLSGYIKEIVYVGFAASAEGSTELHQLVNWRFQSNGSLPATPPKFHAHNVSGSWVSATVDIHNKSYNHSSNKHDKRLGLGIAIAGPAFFCVVLVSLGYFSVRKWRNGRTLKRVKTDLMSCPREFSYKELKVATKGFHSSRIIGQGSFGTVYKALFLPSGAIAAVKRSRQSHDGKTEFLAELSIIAGLRHKNLVQLQGWCVDKGELLLVYDFMPNGSLDKMLYPESEGSQNLLNWSRRLNIAIGLASVLTYLHKECEKRVIHRDIKTGNILLDANYNPRLGDFGLAKLMDHDRSPVSTLTAGTMGYLAPEYLQYGMATEKTDVFSYGVVVLEVACGRRPIEREGQNMVNLVDWVWGFHSQGKIVEAADKRLNGEFTEKEMKKLLLLGLSCANPDSAERPSMTRVLQILSNDEPASTLVVPKVKPCLTFSCGLPLSLDEIVSDSDVESSTEKSLCEIRIG 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1125g00004 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Pral1125g00004 678 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Pral1125g00004 678 CDD STKc_IRAK 362 627 - -
Pral1125g00004 678 CDD lectin_legume_LecRK_Arcelin_ConA 26 256 IPR001220 GO:0030246
Pral1125g00004 678 SUPERFAMILY Protein kinase-like (PK-like) 339 640 IPR011009 -
Pral1125g00004 678 Gene3D Transferase(Phosphotransferase) domain 1 432 637 - -
Pral1125g00004 678 Pfam Legume lectin domain 26 259 IPR001220 GO:0030246
Pral1125g00004 678 FunFam L-type lectin-domain containing receptor kinase VIII.1 320 431 - -
Pral1125g00004 678 Gene3D - 23 256 - -
Pral1125g00004 678 ProSiteProfiles Protein kinase domain profile. 356 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1125g00004 678 FunFam L-type lectin-domain containing receptor kinase VIII.1 432 647 - -
Pral1125g00004 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 262 IPR013320 -
Pral1125g00004 678 PANTHER - 49 631 - -
Pral1125g00004 678 SMART serkin_6 356 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1125g00004 678 Gene3D Phosphorylase Kinase; domain 1 320 431 - -
Pral1125g00004 678 Pfam Protein kinase domain 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1125g00004 Pral-Chr1125 35844 38238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1125g00004 3 663 Receptor kinase-like Gene Family AT5G55830 57.122 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral1125g00004 Pkinase 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1125g00004 - - qsa:O6P43_021312 826.239