Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1124g00003 ATGGGGCATCAAAAATTAGGTTGGTGCAGCTACCGAATTGGCCTTTGCTTGCGGAGGCCAGAAGAGAACCCGTTAGACCTCAACAATTTGCCAGATGACTACTCTAGGGATGGTAAACAAGTTCTTGAAGACGATTTCTCTGGTTTCAGTAAAAAGAAAAGCGGCGGGGAGGATGCGAAAGAAGAGTGTGGTAAGGTCTACGAGTGTAGGTTTTGTTCCCTCAAGTTCTGCAAATCTCAGGCTCTTGGAGGTCACATGAACCGCCACCGCCAAGAAAGGGAAACCGAGACCCTTAACCATGCTCGTCAACTCGTCTTCCGTAACGATCATTCCATGGCTGCCCAAGGGGCCCCTCACTTAGGGTGCTGCCAACCGGTAGTGGCAGGGAGTTACAACAACATAGGAGATCCAACTATGTCTCTGAGGTTTCCCAGATACTTGTCTGCTGCTTCTTCAACATCGTCTCAAGCTTCTCATTCATACCTGTACGCTTCGTCCTCACGACCGGTCTCATCCTTTCCTTCACACTATCACCAACCACCAGCTGTGAGCGATTACTATGTGGGAACCAGTAGTACTGGGAGCGGCGAGCCTGCTGGCTACGCCTGTATCGGTGCACCGGTGGGCCATGAAGGGTCACTTCACAGCTATGCCTATTCTGCAGCACAGCACCGTCTGGATCCTCCTTCAGCGATCAATCGGTTTCAAGATGGATTTTGA 720 0.5083 MGHQKLGWCSYRIGLCLRRPEENPLDLNNLPDDYSRDGKQVLEDDFSGFSKKKSGGEDAKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRNDHSMAAQGAPHLGCCQPVVAGSYNNIGDPTMSLRFPRYLSAASSTSSQASHSYLYASSSRPVSSFPSHYHQPPAVSDYYVGTSSTGSGEPAGYACIGAPVGHEGSLHSYAYSAAQHRLDPPSAINRFQDGF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1124g00003 239 PANTHER ZINC FINGER PROTEIN JAGGED 46 213 IPR045320 GO:0003700
Pral1124g00003 239 FunFam Zinc finger protein STAMENLESS 1 43 115 - -
Pral1124g00003 239 SUPERFAMILY beta-beta-alpha zinc fingers 65 95 IPR036236 -
Pral1124g00003 239 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 94 IPR013087 -
Pral1124g00003 239 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Pral1124g00003 239 Gene3D Classic Zinc Finger 41 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1124g00003 Pral-Chr1124 45290 57023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1124g00003 17 209 C2H2 Transcription Factor Family AT1G13400 44.498 1.68e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral1124g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1124g00003 - - aprc:113871902 297.745