Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1121g00001 ATGGGAATAGCAACACCGCCAGTCCTTCCGCCGATTCTTTCTCACTCCACCAGGCCCCACCATTCCTGTTCTTCCATATTAGACTCCAATTCTATGTCCCAGGATTATCACCAAGGAATCTTCGCCTTCTCGAATGGGTTCGAGAGATCCACTCTAACTCAGCACCACCAGCAACACCAGCAGCAGCAGCAGCAACAGTTAGCGCAGCAGATCCGGAGAGACAAGGTGAGGGTGCAAGGGGGGTTGGACCCGCCGCCGCCGCTAGTGGGTATAGAGGAAGAAGAATCTGGAAACCTTCCCGTGTATGAAACCGGAGGGATGTTATCGGAGATGTTCAATTTCCCTCCTCCCGGCGCCACCGCCACTGAATTGTTGGAACAACAACACCAACCAGCTGCCGCGACGGCCATGTATCGGACCTCCAGGCCGCAACCACTGGCCACTGATTGGTACAGACAAGGGATGTTAAGTGGGTTGGAAAATTCAAAGAATCAGAATAGCCGTGACAATAGTAGTCTACTAGAGCAGCATCATCATCATCATCATCATCCTCAAATTCCAAGCATGAATGCGGACTCGGCTGCCGCCATGCAGCTTTTCCTGATGAACCCACAAACAAGATCGCCTTCTCCTACTCAGAATCCCACTCCTAATTCGACCTCTCTCCAAGGCTTCACTACTCAAGGAGGGGGTTTCGGCCAATTCACATGGGCTCCTCATACTTCTCAGCAAGGAGCACCAGCCACGGCTGCTAATCCACCTCAAATTGGAGGGGTTATGGAAGCTCAAGGTCTTTCCTTATCGTTGTCATCGTCGTTGCAACACTTGGAAGCCGCGAAAGCCGAGGAATTGAGGATGGGAGACAGTGGGTTTCTGTATTACAATCAAGGATCCGGAGGGTCTTCGTCTGCCCAGTATCCGTACAAGACATTGCATTTCCAAGGGTCCGTCGGAGCAGGTCAGAACCACCAGGGACATGTGGGGTTCGGCTCATCAATAGGGGTGGTGAATGTGCTGAGGAATTCAAAGTACGTGAAAGCCGCACAAGAATTGCTCGAAGAATTCTGCAGTGTTGGGAGAGGGCAATTCAAGAGGAATAAATTCGGCAGGCAAAACTCAAACCCTAGTTCCAATCCTCCTACCGGTGGTGGTGGTTCTTCCTCTTCATCAAAGGATCCTCCTCCTTTGTCGTCGGCCGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGTGGATCGAAGATACAACCACTACTGCGAACAAATGCAAATGGTGGTGAACTCATTCGACATGGTAATGGGATTCGGGTCTGCAGTGCCATACACGGCCTTAGCTCAGAAGGCGATGTCGCGCCATTTCCGGTGCCTGAAGGATGCGATAACGGCGCAGCTGAAGCACAGTTGTGAGTTGCTGGGTGAGAAAGACGGAGCAGGAAGCTCAGGTTTAACCAAAGGAGAGACGCCGAGGCTGAAACTTCTGGAACAAAGCCTGAGACAGCAGAGAGCCTTCCACCAGATGGGCATGATGGAACAGGAAGCGTGGCGACCCCAAAGAGGCCTCCCCGAGCGATCCGTCAACGTTTTGCGAGCCTGGCTCTTCGAGCATTTTCTTCATCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGCCTCTCGAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTCCGGCTGTGGAAACCTATGATAGAAGAAATGTACCAACAAGAACTTAAAGAAGTAGAAGGAGAAGAGAGAGAAGAAAGGAACCAAGGCAACAATAACAACAACGTCGCACAAACTCCAACCACAGCAGCAGCAACTTCAACAGAAGCAGCGCCACCACCATCCACAACAACAACAACAACCACAACACCAACAACGACACTCACAACATCAGCAGCAGGCAAAAGATCCCAAATCAATGCTTCTGATGGCGACCCTTCACTCATTGCAATCAATACCCAACCCTTCTCGGAATCCCAACCAAACCACTCTTCCTCTGCCATCACCACCGCTCCAACCGCCGAAGTTGCCGCCACTTCTGAGGTGGCGCCACCCTCGTCTCAGTGTTATGACTCAGACCTGCCCCTTCACAGATCAGTGCCTGCAGATGACACGTGTCGCCATGGCAGCCTCGTTGCAGCAGATTACGGGACCGCCTCTGCTAATTCTGACATTGGTTCTACTCTCATTAGGTTTGGGACCACCGCCGGTGATGTTTCGCTCACCCTAGGGCTACGCCACGCCGGGAACATCCCTGAGAAAGCTCCTCCTTTCTCGGTTAGAGACTTCGGAGGCATTTGA 2346 0.5179 MGIATPPVLPPILSHSTRPHHSCSSILDSNSMSQDYHQGIFAFSNGFERSTLTQHHQQHQQQQQQQLAQQIRRDKVRVQGGLDPPPPLVGIEEEESGNLPVYETGGMLSEMFNFPPPGATATELLEQQHQPAAATAMYRTSRPQPLATDWYRQGMLSGLENSKNQNSRDNSSLLEQHHHHHHHPQIPSMNADSAAAMQLFLMNPQTRSPSPTQNPTPNSTSLQGFTTQGGGFGQFTWAPHTSQQGAPATAANPPQIGGVMEAQGLSLSLSSSLQHLEAAKAEELRMGDSGFLYYNQGSGGSSSAQYPYKTLHFQGSVGAGQNHQGHVGFGSSIGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKRNKFGRQNSNPSSNPPTGGGGSSSSSKDPPPLSSADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDMVMGFGSAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGAGSSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNVLRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMIEEMYQQELKEVEGEEREERNQGNNNNNVAQTPTTAAATSTEAAPPPSTTTTTTTTPTTTLTTSAAGKRSQINASDGDPSLIAINTQPFSESQPNHSSSAITTAPTAEVAATSEVAPPSSQCYDSDLPLHRSVPADDTCRHGSLVAADYGTASANSDIGSTLIRFGTTAGDVSLTLGLRHAGNIPEKAPPFSVRDFGGI 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1121g00001 781 FunFam BEL1-like homeodomain protein 4 524 586 - -
Pral1121g00001 781 MobiDBLite consensus disorder prediction 159 188 - -
Pral1121g00001 781 SMART HOX_1 521 585 IPR001356 GO:0003677
Pral1121g00001 781 Coils Coil 584 604 - -
Pral1121g00001 781 MobiDBLite consensus disorder prediction 51 73 - -
Pral1121g00001 781 MobiDBLite consensus disorder prediction 366 403 - -
Pral1121g00001 781 Pfam Homeobox KN domain 538 577 IPR008422 GO:0003677|GO:0006355
Pral1121g00001 781 SMART prehox3 333 469 IPR006563 -
Pral1121g00001 781 Gene3D - 524 586 - -
Pral1121g00001 781 CDD homeodomain 521 582 IPR001356 GO:0003677
Pral1121g00001 781 MobiDBLite consensus disorder prediction 1 26 - -
Pral1121g00001 781 MobiDBLite consensus disorder prediction 204 257 - -
Pral1121g00001 781 MobiDBLite consensus disorder prediction 51 72 - -
Pral1121g00001 781 MobiDBLite consensus disorder prediction 366 395 - -
Pral1121g00001 781 MobiDBLite consensus disorder prediction 204 250 - -
Pral1121g00001 781 Pfam Associated with HOX 338 468 IPR006563 -
Pral1121g00001 781 MobiDBLite consensus disorder prediction 605 702 - -
Pral1121g00001 781 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 202 606 - -
Pral1121g00001 781 MobiDBLite consensus disorder prediction 593 705 - -
Pral1121g00001 781 SUPERFAMILY Homeodomain-like 523 588 IPR009057 -
Pral1121g00001 781 ProSiteProfiles 'Homeobox' domain profile. 518 581 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1121g00001 Pral-Chr1121 16391 23057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1121g00001 741 781 Homeobox Transcription Factor Family AT2G23760 69.048 1.96e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pral1121g00001 POX 3.4e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1121g00001 - - pcin:129311153 1249.19