Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1117g00005 ATGGCTGAGGTTGCTGTATCAATAGTTGTTGAAAAGCTTTCAGAACTTCTAGTCGAACAAGCAGTGGGCGCAGTTTCTGTACTTGATGGTTTGCGCAACGACGTAGAGAGGCTGAAGAATGAGTTACGATGGATGCAATGCTTTCTGAGGGATGCCGATGCTAAACAAGAAGAAAACCAGCTGGTCCGCTTGTGGGTTTCCGATATTAGAGATATTGCTTTTGAAGCTGAGGAGCTAATAGAGATTTATGTTTCGAAGGTAGCGTGTCAAGGCAGATGGTACAGAGTCTTCAGATCCTTACATCTCTACGAGGTCTCCAGAAAAATCGAGAAAATTCGAACTAGGATACATGATGTATCTACAAAGCGGGAAACCTACGGCGTTGTCAGAGAAACACAGGGGAAAATTATTACCAATGACCGGTTGAGGTACTGGAGACAGCCATGGCCCTATACTGAAGAGGAGTGTGTAATTGAGCTTGAAGATGACATGGAATTGCTGGTCAATCAACTGCTTACAGTGGACGCTGGGCGGGTGGTTTCTATAGTTGGTATGGGGGGTTTGGGCAAAACCACCTTAGCTAAGAAACTGTATAATCACAGCAAAATTCATAACCATTTTGATTGCAGAGCTTGGGTTTATGTGTCCAAAGAATACAGAAGAAGAGACATTTTGCTAGGAATTCTCAAGGATGCAGATGCTCGCGGTAGAAATGAGGTTGACGGACGGGAGAGATGGCGGGAGGAAGACATGGTGACCCGCCTGCATACTATCTTGGACGAGAAAAGGTATTTGGTAGTTCTTGATGATATTTGGAGCACGGAGGTTTGGGATAGCCTAGAATCTGCATTTCCCAGAGGGAAGATGGGTAGTAAAATTTTGCTCACAACTAGAGACATGAGAATAGGTAAGCACGCCGGTGGCGGCGGTAACCCTCATAAACTACGAACGCTGACTGAAGATGAGAGTTTGAGATTGCTGTGCCACAAAGCATTCCCCGGAATGAATAGCATCCCCCCGGAGTTGGAGAATCTTGCAAGGGATGTCGTAGTGAAATGTGGTGGTTTGCCTCTGGCTGTGGTGGTGGTTGGCGGTTTATTATCAAGAAAACTTCAATCAAACGAGGAATGGATGCGAGTGGCCAAAAATATCAGTTGGCATCTGCTAAATGAGCAAGACAGAATCCGATATATTTTGGCCCTGAGCTACAATGACTTGCCTTCTCACTTGAAATCATGCTTTCTCTACCTAGGTCTTTTCCCAGTCGGCATGAACATTCAGACGAAAAGGTTGATTCGCCTGTGGGTCGCAGAAGGTTTTTTACCGCAAGAAGGGGCAGAAACAGCAGAAGATGTTGCTGAGAACTGCCTAAACGAGTTGATTGGTAGGTGCATGGTTCAAGTGGGCTCAGTAAGTTCGTTAGGCAAAGTTAAGACAATTCGCATCCATGATCTTCTCAGAGATATTTCCGTCTCCAAAGGGGAAGAGGAATATTTTCTCCGCATATATCTTGGGAGCCTGGAAAGTTTATCGGCATCTCAGCTAAATAGATCCCGCCGCCATGCCATACATTCTTGCTATGACCGTTATGACTTCTTGAAACACGATGCTTGTCATTCACGTTCCCTCCTCTTCTTCAATAGAGAATATAATGCAGATATAGTGAAGAAAATCAGGTTCTATGACCAGCAGTACAATATGAATTTCCTGCTAGAAAAGAAACTGAATTTAATTTTTAGCAAATTCAAGCTTCTCAGGGTTTTAGAGTTAGACGGTGTTCGGGCTGTTCGTCTGCCGAATACAATAGGGGACCTTATTCAATTAAGGTATCTTGGACTGAGGAAGACTAATTTGGAAGAGGAACTTCCACCTTCCATTGGAAACTTGCTGAACCTACAGACGCTTGATTTAAGGTACTGTTGTTTTCTGAAGAAGATACCAAATGTGATTTGGAAGATGATTAGTTTGAGGCATTTGCTTCTGTACACTCCATTTGATTCTCCAGATAGCCGTCATCTAAGATTGGATACATTAACCAATTTACAAAGCCTGCCGTACATTGAGGCTGGAAACTGGATAGAAGATGGGGGTCTAGAAAACATGAAAAGTCTCAGGCAATTGGGAATATATGAATTATCCGGAAAAGTGGTGAGGTCAGTGCTTTCTATTGCACAAGGATTACCTCACCTTCACTCACTGTCTCTATCACTTCAATCAGAAGAAGATGAATTTCCAATTTTGATGCAGCTTTCTCAGTGCACTCATCTCCGCAAGCTCTCTTTGAATGGGAGGATCAAGAAGCTACCTGACCCTCATGAATTCCCGCCAAATCTTATCAAACTAACTCTGCATAACTCCCATTTACAGATGGAATCCATTGCCAAACTTGAGAGGCTGCCAAAACTGAAAATGCTTGTTTTAGGGAAAGCGGCGTACAACAGGAGGGAATTGATCTTCTCTGCCGATGGATTTTCACAATTGCGAATTCTAAGGCTTAATGTTCTGAAAGAATTGGAGGAGTGGACAGTTGAGGAAAGGGCAATACCAAGACTCGAGCATGTCATTATTAATCGCTGTGAGAAGCTGAAGAAGATCCCAGAAGGACTGAAGGCTCTCTCTTCTCTCAAGGAAATAAAGATTATAGGAATGCCAGTAGAATTTGAACAGAGACTACGAACTAAAGACTTGCTGGAATTCCAAAATATCCCTTCAATTGAATCAACTACAGACATTTTGGCAAATGATTTCAACGGCGGGCACAATGTTGGTCGTTGA 2775 0.4335 MAEVAVSIVVEKLSELLVEQAVGAVSVLDGLRNDVERLKNELRWMQCFLRDADAKQEENQLVRLWVSDIRDIAFEAEELIEIYVSKVACQGRWYRVFRSLHLYEVSRKIEKIRTRIHDVSTKRETYGVVRETQGKIITNDRLRYWRQPWPYTEEECVIELEDDMELLVNQLLTVDAGRVVSIVGMGGLGKTTLAKKLYNHSKIHNHFDCRAWVYVSKEYRRRDILLGILKDADARGRNEVDGRERWREEDMVTRLHTILDEKRYLVVLDDIWSTEVWDSLESAFPRGKMGSKILLTTRDMRIGKHAGGGGNPHKLRTLTEDESLRLLCHKAFPGMNSIPPELENLARDVVVKCGGLPLAVVVVGGLLSRKLQSNEEWMRVAKNISWHLLNEQDRIRYILALSYNDLPSHLKSCFLYLGLFPVGMNIQTKRLIRLWVAEGFLPQEGAETAEDVAENCLNELIGRCMVQVGSVSSLGKVKTIRIHDLLRDISVSKGEEEYFLRIYLGSLESLSASQLNRSRRHAIHSCYDRYDFLKHDACHSRSLLFFNREYNADIVKKIRFYDQQYNMNFLLEKKLNLIFSKFKLLRVLELDGVRAVRLPNTIGDLIQLRYLGLRKTNLEEELPPSIGNLLNLQTLDLRYCCFLKKIPNVIWKMISLRHLLLYTPFDSPDSRHLRLDTLTNLQSLPYIEAGNWIEDGGLENMKSLRQLGIYELSGKVVRSVLSIAQGLPHLHSLSLSLQSEEDEFPILMQLSQCTHLRKLSLNGRIKKLPDPHEFPPNLIKLTLHNSHLQMESIAKLERLPKLKMLVLGKAAYNRRELIFSADGFSQLRILRLNVLKELEEWTVEERAIPRLEHVIINRCEKLKKIPEGLKALSSLKEIKIIGMPVEFEQRLRTKDLLEFQNIPSIESTTDILANDFNGGHNVGR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1117g00005 924 Gene3D - 144 307 IPR027417 -
Pral1117g00005 924 Gene3D Ribonuclease Inhibitor 552 913 IPR032675 -
Pral1117g00005 924 Pfam NB-ARC domain 161 404 IPR002182 GO:0043531
Pral1117g00005 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 417 IPR027417 -
Pral1117g00005 924 Gene3D - 317 402 IPR042197 -
Pral1117g00005 924 FunFam Probable disease resistance protein At1g63360 403 492 - -
Pral1117g00005 924 SUPERFAMILY L domain-like 482 909 - -
Pral1117g00005 924 Pfam Rx N-terminal domain 5 90 IPR041118 -
Pral1117g00005 924 Gene3D - 4 123 - -
Pral1117g00005 924 PRINTS Disease resistance protein signature 179 194 - -
Pral1117g00005 924 PRINTS Disease resistance protein signature 353 367 - -
Pral1117g00005 924 PRINTS Disease resistance protein signature 258 272 - -
Pral1117g00005 924 PRINTS Disease resistance protein signature 627 643 - -
Pral1117g00005 924 PANTHER DISEASE RESISTANCE PROTEIN RP 28 859 IPR044974 GO:0006952
Pral1117g00005 924 Gene3D - 403 493 IPR036388 -
Pral1117g00005 924 FunFam Probable disease resistance protein At1g61300 145 309 - -
Pral1117g00005 924 CDD RX-CC_like 2 120 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1117g00005 Pral-Chr1117 25416 30480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1117g00005 178 489 WRKY Transcription Factor Family AT5G45050 24.214 4.00e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1117g00005 - - gmx:100788025 1275