Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1107g00002 | ATGGAGCCAGGGTTGGTTTTGAGCGAAATGCAGGAAATGCATTCCGTCGCCGGAGGTAGATTTTTTGGCGCCGGGGGTGCTGCTGGAAACAGGAGGCTCAGACCTCACCACCATCCTCGCAACAACGACAGCCAGGACCACCAGGCCTTGAAGTGCCCGAGGTGTGACTCCCTCAACACCAAGTTCTGCTACTACAACAACTACAACCTCTCTCAGCCGCGCCATTTCTGCAAGGGCTGCCGTAGGTACTGGACCAAGGGCGGCGTCCTCCGCAACGTCCCCGTCGGCGGCGGTTGTCGGAAAGCGAAGCGCTCCAAGCCCAAGAATTCTTCCTCAGAAACTTCCTCCGCCACCGCGACAAAAGCACCACCGCCGGCCCCGTCATCATCGCTACCGGAGCGCGAGGGTAAGACGTCCAACTCTCATTCCAGCAGTGAAAACTCCAGTCTTACCGCTGTCGCCGCCGCCGTCACCACAGAAGCGGTTTCAGCTCCTTCATCCAACTCGACGTCCAATAACTTGTTTGACAATCTTCAGGATTCGAATCCCGTCGTCCATTCTGATTCGAAGCCTAGCTCGGAACCAGGCGTCACTGAACAAGGAGGAGACTTCGGGATTTTCTCGGAGATAGAGAACTTGACGAGCCTGATCACACCCACCAACGAGACCCTGGCGTTCGGCTACGGTAATATCGCCGACGCGTCTTCGTTTCAGCTGTGCAGCCAGTGGCATAAGGGGATGAACACGAGCGGCCGTTGTCAGCAGGAGTTGAAGTGGCCGGAGATGAGGGCGATGACGACCGGATCGTTGATGGAGCAGACGGTGCCTGGGGATTGGCAGGGGAGCACGGATCATCAAAGTTTTTTCGATGTTGGGAACACCGTCGATCAGGTTTTGTGGAGTCACAATCAGTGGAATGAAGACAATTCGAGTCTTTTTCAGCTACCCTGA | 951 | 0.5615 | MEPGLVLSEMQEMHSVAGGRFFGAGGAAGNRRLRPHHHPRNNDSQDHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKGCRRYWTKGGVLRNVPVGGGCRKAKRSKPKNSSSETSSATATKAPPPAPSSSLPEREGKTSNSHSSSENSSLTAVAAAVTTEAVSAPSSNSTSNNLFDNLQDSNPVVHSDSKPSSEPGVTEQGGDFGIFSEIENLTSLITPTNETLAFGYGNIADASSFQLCSQWHKGMNTSGRCQQELKWPEMRAMTTGSLMEQTVPGDWQGSTDHQSFFDVGNTVDQVLWSHNQWNEDNSSLFQLP | 316 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1107g00002 | 316 | MobiDBLite | consensus disorder prediction | 94 | 203 | - | - | |
Pral1107g00002 | 316 | MobiDBLite | consensus disorder prediction | 26 | 50 | - | - | |
Pral1107g00002 | 316 | MobiDBLite | consensus disorder prediction | 109 | 124 | - | - | |
Pral1107g00002 | 316 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 38 | 220 | IPR045174 | GO:0003700|GO:0006355 | |
Pral1107g00002 | 316 | ProSiteProfiles | Zinc finger Dof-type profile. | 50 | 104 | IPR003851 | GO:0003677|GO:0006355 | |
Pral1107g00002 | 316 | MobiDBLite | consensus disorder prediction | 132 | 196 | - | - | |
Pral1107g00002 | 316 | ProSitePatterns | Zinc finger Dof-type signature. | 52 | 88 | IPR003851 | GO:0003677|GO:0006355 | |
Pral1107g00002 | 316 | Pfam | Dof domain, zinc finger | 48 | 104 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1107g00002 | Pral-Chr1107 | 19653 | 21393 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1107g00002 | 30 | 316 | C2C2-Dof Transcription Factor Family | AT5G60850 | 39.590 | 2.93e-45 | 154 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Pral1107g00002 | zf-Dof | 6e-33 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1107g00002 | - | - | pcin:129308249 | 336.65 |