Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1103g00006 ATGGATTCTCTGCACCAGCCCCTGCCCTTGGCGCTCTTGTTCATCGTCCCGCTCCTCTTACTCCTCGGCCTCCTCGCTCGATCTCGCCGGCGCTCGCCCTTCCCGCCTGGGCCAAAAGGCCTCCCCATCATCGGCAACATGCTGATGATGGACCGGCTCACCCACAGAGGCCTGGCCAAGCTCGCCTCCCAATATGGCGGCGTTTTCCACCTCAAAATGGGCTTCCTCCGCATGGTCGCCATCTCCGACCCCGACGCCGCTCGCCAAGTTCTTCAGGTCCACGACAACATCTTCTCCAACCGACCCGCCACCATAGCCATCAGCTACCTCACCTACGACCGCGCCGACATGGCCTTCGCTCACTACGGCCCCTTCTGGCGCCAGATGCGCAAGGTCTGCGTCATGAAGCTCTTCAGTCGCAAGCGGGGCGAATCGTGGCAGTCGGTGCGAGACGAGGTGGACACCGTGGTGCGCACCGTGGCCAGCAACACCAGCAAGCCGGTGAATATCGGTGAGTTGGTGTTTTCGCTGACAAAGAACATAATATACCGAGCGGCGTTCGGGTCGAGCTCGCAGGAAGGACAGGACGAGTTCATAGGGATATTGCAGGAGTTCTCCAAGTTGTTCGGAGCGTTCAACATCGCGGACTTCATCCCTTACCTCGGGTGGATCGACCCGCAGGGACTGAACGCCAGACTGGCCAAGGCACGAGCGTCTCTGGACAGATTCATAGACAAAATCATCGACGAGCATATCCAGAAAAGGAGGAGTAAAAGCGATGGCTGCGGCGATGAGGAAACGGACATGGTGGATGAGCTGATGGCTTTTTACAGTGAGGAAGCTCAAGTGAGTGAGTCTGAGGATCTCCACAACTCCATCAAACTCACCAAGGATAACATCAAAGCCATCATCATGGACGTGATGTTTGGTGGGACCGAGACGGTGGCGTCGGCAATAGAGTGGGCGATGGCGGAGCTGATGAGAAACCCGGAAGATCTAAGGCGGGTCCAGCAAGAGCTCGCTAACGTGGTCGGCTTGGATCGCAGAGTTGAAGAGTCCGACTTCGACAAGCTCACCTTCCTCAAATGCGCCCTCAAGGAGACTCTGCGCCTCCACCCACCCATCCCCCTGCTCCTCCATGAGACCGCCGAAGATGCTGAGGTTTCCGGCTACTATATCCCCAAGAAGTCACGTGTCATGATCAACGCGTGGGCCATCGGGAGGGACAAGAACTCTTGGGACGACCCGGACTCCTTTAAGCCTTCTCGATTTTTGAAACAGGGCGTGGCGGATTTCAAGGGAAGCAATTTCGAGTTTATTCCGTTCGGGTCGGGTCGGAGGTCATGCCCCGGGATGCAACTCGGACTCTACGCGCTGGACATGGCGGTGGCTCACCTTCTTCATTGTTTTACTTGGGAATTGCCGGACGGGATGAAGCCGAGTGAGATGGACATGAGCGACGTGTTCGGACTGACCGCTCCCAGAGCGAGTCGACTCGTTGCCATTCCCAGTAAACGCGTGGTGTGCAACCTCTCTTAG 1539 0.5744 MDSLHQPLPLALLFIVPLLLLLGLLARSRRRSPFPPGPKGLPIIGNMLMMDRLTHRGLAKLASQYGGVFHLKMGFLRMVAISDPDAARQVLQVHDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKLFSRKRGESWQSVRDEVDTVVRTVASNTSKPVNIGELVFSLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGWIDPQGLNARLAKARASLDRFIDKIIDEHIQKRRSKSDGCGDEETDMVDELMAFYSEEAQVSESEDLHNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRNPEDLRRVQQELANVVGLDRRVEESDFDKLTFLKCALKETLRLHPPIPLLLHETAEDAEVSGYYIPKKSRVMINAWAIGRDKNSWDDPDSFKPSRFLKQGVADFKGSNFEFIPFGSGRRSCPGMQLGLYALDMAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPRASRLVAIPSKRVVCNLS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1103g00006 512 Pfam Cytochrome P450 35 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 SUPERFAMILY Cytochrome P450 27 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Pral1103g00006 512 FunFam Cytochrome P450 84A1 27 505 - -
Pral1103g00006 512 Gene3D Cytochrome P450 27 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1103g00006 512 PANTHER CYTOCHROME P450 84A1-RELATED 3 511 - -
Pral1103g00006 512 CDD CYP71-like 64 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1103g00006 Pral-Chr1103 46066 49172 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1103g00006 42 511 Monolignol Biosynthesis Gene Families AT4G36220 76.744 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1103g00006 K09755 - gmx:100783430 820.076