Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1102g00005 ATGAACGACTCATCACAGGATGTTTACGAGTATCTGATGAATAAGAGGAAACACAGCACCGGCTCCGAGGAGTCGAGAACGGGAAGGAGAAGGTTGAAGAAGGAAGGAAGTCAAGAGAGCAGCAAGAAAGGATCATCAGTGTCGACAGCTCTGAAGCTGTACGAGGACCCATGGAAGATAAAGAAGACGCTGACGGAGAGCGATCTGGGAATCCTGAGCAGGCTGCTGCTGGCGGCGGACATGGTGAAGAGGCACATTCTGCCTATGCTGGGAGGTGAAGGCGCAAGAGCCGCAGAGAGCGAAGAAGGAACGCAGGTTAGGGTTTGGGACACGGACACCAAATCCATGCACCAGCTGCTGCTGAAGCGGTGGTCGTCTTCAAAGAGCTATGTTCTGATCGGCAAGTGGAGTCAGGATTTCGTGAGGCGGAGGGAATTGAAGAAAGGCGATGAGATTGGCTTCTACTGGGACCCATATACCTCCCTCTTCAACTTCTGTGTTCTTAAGCGCGCTAATGGCTCTTAG 525 0.5238 MNDSSQDVYEYLMNKRKHSTGSEESRTGRRRLKKEGSQESSKKGSSVSTALKLYEDPWKIKKTLTESDLGILSRLLLAADMVKRHILPMLGGEGARAAESEEGTQVRVWDTDTKSMHQLLLKRWSSSKSYVLIGKWSQDFVRRRELKKGDEIGFYWDPYTSLFNFCVLKRANGS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1102g00005 174 Gene3D - 57 172 IPR015300 -
Pral1102g00005 174 MobiDBLite consensus disorder prediction 10 40 - -
Pral1102g00005 174 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 31 170 - -
Pral1102g00005 174 MobiDBLite consensus disorder prediction 1 46 - -
Pral1102g00005 174 CDD B3_DNA 58 169 IPR003340 GO:0003677
Pral1102g00005 174 SUPERFAMILY DNA-binding pseudobarrel domain 57 168 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1102g00005 Pral-Chr1102 39731 40611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1102g00005 16 154 B3 DNA Binding Superfamily AT1G25560 27.143 3.08e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1102g00005 - - pvu:PHAVU_009G204600g 231.491