Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1102g00004 ATGCTTCATCTTCGACTCATGAAGAGCTCATCATCATCACCAGATGAATCTGTTGACGAGTTTCTGAGGAACAAGAGGAAACACATCAGCAGCAGCTCCGAAGATTCGAGAGAAGGATGGAGAAGGTTGAAGAAGGAAAGCAAGAATGGATCGTCAGTGTCAACCAGTCTGAAGCTGTACGAGGACCCGTGGAAGATAAAGAAGACGCTGACGGAGAGCGATCTGGGAATCCTGAGCAGGCTGCTGCTGTCGGCGGACATGGTGAAGAATCACATGTTGCCTATGCTGGGGGGCGAGGACGCAAGAGCCGTAGAGAGCGAAGAAGGAGCAGAGGTTAGGGTTTTGGACATGGACACCAAATCCATGCACCAGCTGATGCTGAAGCGGTGGTCGTCTTCAAAGAGTTATGTTCTGATCGGCAAGTGGAGTCAGGATTTCGTGAGGCGGAGGGAATTGCACAAAGGTGATGAGATTGGCCTCTACTGGGACCCTTATTCTTCCCTCTTTAACTTCTGTGTTCTTAAGCGCGCTAATTGTCCGTAG 543 0.5028 MLHLRLMKSSSSSPDESVDEFLRNKRKHISSSSEDSREGWRRLKKESKNGSSVSTSLKLYEDPWKIKKTLTESDLGILSRLLLSADMVKNHMLPMLGGEDARAVESEEGAEVRVLDMDTKSMHQLMLKRWSSSKSYVLIGKWSQDFVRRRELHKGDEIGLYWDPYSSLFNFCVLKRANCP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1102g00004 180 MobiDBLite consensus disorder prediction 1 47 - -
Pral1102g00004 180 MobiDBLite consensus disorder prediction 1 17 - -
Pral1102g00004 180 MobiDBLite consensus disorder prediction 18 47 - -
Pral1102g00004 180 SUPERFAMILY DNA-binding pseudobarrel domain 63 174 IPR015300 -
Pral1102g00004 180 CDD B3_DNA 64 175 IPR003340 GO:0003677
Pral1102g00004 180 Gene3D - 62 178 IPR015300 -
Pral1102g00004 180 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 35 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1102g00004 Pral-Chr1102 22595 23348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1102g00004 66 161 RAV Transcription Factor Family AT4G01500 31.633 1.86e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1102g00004 - - pvu:PHAVU_009G204600g 216.853