Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1101g00003 ATGGCATCACCATTCCAGTCTAATTCATCTGCTCTGCGAGAAACACAGGGAGAGAGGCAGATCAGCGCAGAATATGTAAGAGATAGACCAATTAGGAAGCTTGGAGAAAGGATCGAAGAGAGACAGATCGAGAGAAAGACAGCCATTTTTGCTTTGGGCGGGCTTCTTCTGCAATTTGAAGAAAACCGCTGGCTCCGCATGGATGCTGGCCCCATCTTCAGCCGCAACCGCTGGAAAGAGAAGGTGATTGTCATAATGGGTGCCACCGGAGCCGGGAAATCCAGCCTCTCCATCGACCTCGCAACCCGTTTCCCCTTCTCCGAGATCATTAACTCGGATAAAATGCAAGTTTACACAGGCCTCGACATCACCACCAACAAGATCCCCATTGAGGAGCGCAAAGGCGTCCCTCATCATCTCCTCGGCGATGTCGACCCACAAAACGGAGAGTTCACGCCTTTAGATTTTCGCTTGCGCGCCGGCTCTGTCATCTCCGACATTACTTCCAGGAGGAAGATTCCCATCGTTGTTGGTGGGTCTAACTCGTTCGTTCACGCTCTGCTCGCGGACCGATTCGACCCCGAGATAAATGTATTCGATGGGTCGTCATCGTCGTCGAGTTTGATCTCATCGGAGTTGAGATACGATTGCTGCTTCTTGTGGGTGGACGTGTCATTTCCTCTGTTGTCAGATTACTTGATGAAGCGAGTCGACGACATGCTCGACATGGGAATGGTGGAAGAGTTAGCCGAGTTTTTCAACCCGGACGCCGACGATTTAGAGGATGACTCGGAGAATCGAACCGGATTGAGAAAGGCCATCGGTGTGCAGGAGTTCGATCGGTATTTCAAAAGATACCCCCCACCGGCAGGGCTGAGCGCGGAGTGTACATGCGAAGAGGATCGGGTACGGAAGGGGGCATACGAAGACGCCGTAAGAGCGATAAAGGACAACACGGGTCGGCTTGTGAAAAAACAGATAGAGAAAATCTTACGGCTAAGAGGGTCAGGGTGGGACCTACGGAGAGTGGACGCGACGGAGGTGTTCAGGGCGAAGTTGGGAAAGAGCAGCGGCGGAAGGTGGTCTGAAATTTGGGAGAGGGAGGTGCTGGAGCCAAGCGTGAAGATTGTGAGTAGCTTCTTGCGGGAGTAG 1152 0.526 MASPFQSNSSALRETQGERQISAEYVRDRPIRKLGERIEERQIERKTAIFALGGLLLQFEENRWLRMDAGPIFSRNRWKEKVIVIMGATGAGKSSLSIDLATRFPFSEIINSDKMQVYTGLDITTNKIPIEERKGVPHHLLGDVDPQNGEFTPLDFRLRAGSVISDITSRRKIPIVVGGSNSFVHALLADRFDPEINVFDGSSSSSSLISSELRYDCCFLWVDVSFPLLSDYLMKRVDDMLDMGMVEELAEFFNPDADDLEDDSENRTGLRKAIGVQEFDRYFKRYPPPAGLSAECTCEEDRVRKGAYEDAVRAIKDNTGRLVKKQIEKILRLRGSGWDLRRVDATEVFRAKLGKSSGGRWSEIWEREVLEPSVKIVSSFLRE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1101g00003 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 262 IPR027417 -
Pral1101g00003 383 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 79 381 IPR039657 -
Pral1101g00003 383 Gene3D - 79 381 IPR027417 -
Pral1101g00003 383 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 226 340 - -
Pral1101g00003 383 Pfam IPP transferase 212 327 - -
Pral1101g00003 383 Pfam IPP transferase 116 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1101g00003 Pral-Chr1101 33381 34875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1101g00003 85 381 C2H2 Transcription Factor Family AT2G27760 30.435 2.66e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1101g00003 K10760 - qsa:O6P43_025717 459.529