Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1100g00021 ATGGATTCTGACTTCTGGACCTCGCGCCTTGCCGCCGCCAAACGCCATTATGGGATTCAGCATCAGAGTCAGAATTCGCCCTTGGATCGGTTGGGAATCGACGATTTCGATGTGGAGGACGATGTCCGGCTCTATTTTTCATGCCCGTACTGTTACGAAGACTTCGACATATCCTCGCTTTGTTCGCATCTCGAAGATGAGCACTCATGCGAAACAAGGGTCACGATTTGCCCTATATGCTCAGTTAAAGTTGCTCGAGACATGCTAAGTCACATAACTCGGCAGCATGGACACTTGTTTAAGTTGCAGAGAAGACATAGGTTAAGAAAAGTTGGTATGCCAAACAGTAAGGCATTGTCCCTTCTGGGGAGGGATCTGCGTGAAGCTCATCTACAAGTGCTCCTTGGTGGTGTGGACGATATTTCAAAATCTGGGGTACCAAGTGCTGAAGATTCTTCTGCAAAGAATATGGCACCTCCACATATTTGGAAATCAAGTTTTGATCCCTCCTTGAGTACTGAAGAACGGGAGAAAAGGATGAGACAAGCTGCTGGGAGATCTGGTTTTGTGCAGGATTTGTTTCTTTCAACTTTGTTGGAATAG 603 0.4643 MDSDFWTSRLAAAKRHYGIQHQSQNSPLDRLGIDDFDVEDDVRLYFSCPYCYEDFDISSLCSHLEDEHSCETRVTICPICSVKVARDMLSHITRQHGHLFKLQRRHRLRKVGMPNSKALSLLGRDLREAHLQVLLGGVDDISKSGVPSAEDSSAKNMAPPHIWKSSFDPSLSTEEREKRMRQAAGRSGFVQDLFLSTLLE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1100g00021 200 Pfam Stress-induced protein Di19, C-terminal 145 198 IPR027935 -
Pral1100g00021 200 SUPERFAMILY TRAF domain-like 44 105 - -
Pral1100g00021 200 MobiDBLite consensus disorder prediction 145 184 - -
Pral1100g00021 200 PANTHER PROTEIN DEHYDRATION-INDUCED 19 32 199 IPR033347 -
Pral1100g00021 200 Pfam Drought induced 19 protein (Di19), zinc-binding 46 97 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1100g00021 Pral-Chr1100 525117 528331 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral1100g00021 Di19_C 1.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1100g00021 - - pcin:129285120 343.969