Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1100g00020 | ATGGCACTTACTAGTGCTCCGGGTTCTTCTACAATCTCACTCATGAGTTATCATGTTTTCTTAAGTTTTAGAGGAGAAGATACTCGAACAAATTTGACTGATCATTTATACTTTGCATTACTCCGAAAGGGAGTCGTAACATTTAGGGATGATGAAGAACTTGAAAGAGGACAAGTTATTTCTGAGAAACTCATTAAAGCTATTGGGCAATCTCTGTTTTCCGTTGTTGTCCTCTCTCAACATTATGCTTCTTCCTCGTGGTGTTTGGATGAATTGGAAAAGATTATGGAATCCAAACAAAACCATGGGCAAACAGTTTTTCCAGTTTTTTATGGTGTAGATCCATCTGATGTACGACGTCAGAAAAACAGCTTTGCCACAGCTTTTGAGAAACACACACGCGTCTTTTCAGAGGATAAAGTACGAAGATGGAGAGAAGCTTTAACCATGGTCGCTAATTTGTCTGGTTGGGATACCAGAAATAGACATGAAGGAGAAATTGTCGAAGACATTGCCAAGTTCATATGGAACAAATTATGTGATAAATTGCCATCAAGTTTTGAACATTTAGTTGGAGATGTGCAATCAAAGGCAGAGAGGATAATCTCCAGTTTAAAGATAGGATTGGATGATAAGTGCTTCATAGGGATATGGGGTATGGGTGGGATAGGTAAGACAACTCTTGCTCGAGTTGTTTATGATTCAATCCGAAAAAAGTTTGACACTCGTTGTTTTCTTGCCAATGTAAGGGAAGATTCCAAAAGGGTTGCCTTGGTTGGCTTACAAAAGAAACTTCTTTCTTGTCTTGGACTAGGAGAACCAGAAATAAGTGACTCCTTTCAGGGACGAGATGTCATAAGAAATTTCTTGTGCCATAAGAAGGTTCTCATTGTTCTTGATGATGTAAGCCATAGACGTCAGTTGGATAATTTGGCTAGAAATAAAGAGTGGTTTGGTGCAGGGAGCAAAATAATAATAACTACTCGAGATATACAATTATTGACACAGTATGAACAGTTTGAAGCATATGAAGTGGGGAGGTTAAGTGCAGATGAGTCCCTTAAACTCTTCTGTCAGAAAGCATTCAAAAAAGACGAGCCAAACCGAAGTTATTTGGATTTGTCCAGAGAAGTAGTTGAATATGCCAGTGGACTTCCTTTGGCACTTGAAGTCTTGGGATCTTTTCTTTGTAGGAGAAAGCAATCTGAATGGAGAGACACATTAGAAAAACTGAGGCAAAATTTACATCATGATATTTTTAATCAACTTCGCATCAGTTATGATGGATTAGAAGATGAAGAGTACAGGAGAATGTTTCTAGATATTGCATGTTTTTATAATGGGGAGGCCAAATCTAAGGTCATAGGTATATTGAAAATATGTGGCCTTCATCCAATAATTGGAATTCAAGTTCTTATAGAAAAATCTTTGCTAGGCATCCAGCTTGAATCTAGTTTAGATTCAAGGGAAATTGCAGAAGATCATCATTATATGCCAGATGTTCTTAAAATGTTGAGAAGGGACATTTTCTTGCCAACAGATTTCTATGACACGTTGCTTCTTGATGCTTCCAAAGAATGTCTACATATGCACGATTTGCTTCAAGAGATGGGAAGAAGCATTGTTTTGCAAGAATCTCCTGGTGATGCTAGTCGGCGCAGTAGATTGTGGGTTTTAGAGGACATTGATCTTGTGTTGAAAGGAAATAGGTCTTTGGGTAAGCTGAGGATCATTGATTTGAGTGATTCTGATGACCTAATAGAGACTCCAGATTTCTCTGCAACACCAAATCTGGAAGAGTTAGTCCTTACTCATTGCAGCAACCTAGTTCGGATTCATGAATCTGTTGGACAGTTAAAGAAGTTGGTTAAGCTACGTGTGGGATATTGCATAAATCTTGTAACTCTTCCAAGTTATTTGGAAACAAATAATCTAGAGGAGTTTGTTCTTGGTGGATGCATAAATCTTCAGAAACTTCCTGAATTTGGCAGAAATATGGCAAATCTATACTTCTTGGATGTGAGGAGCACTAGAATCAAGAAGATTCCTTTATCCATAATTCATTTAATAAATCTCAGATATTTAGATGTGAGTGATTGCAACATGCTCAAGTCAATGCCTGAGCTCCCTCCAAATTTGATCATATCTGGAAGCTATTGTCCTCTGTTGAAGCTTACGACAGCTCTCGTACACCTATACGACTCGCATGTCTTTAAGGTTTCATATCTATCTCTTCCTTCGTTTCTCATACATTTTTTTTAA | 2262 | 0.3784 | MALTSAPGSSTISLMSYHVFLSFRGEDTRTNLTDHLYFALLRKGVVTFRDDEELERGQVISEKLIKAIGQSLFSVVVLSQHYASSSWCLDELEKIMESKQNHGQTVFPVFYGVDPSDVRRQKNSFATAFEKHTRVFSEDKVRRWREALTMVANLSGWDTRNRHEGEIVEDIAKFIWNKLCDKLPSSFEHLVGDVQSKAERIISSLKIGLDDKCFIGIWGMGGIGKTTLARVVYDSIRKKFDTRCFLANVREDSKRVALVGLQKKLLSCLGLGEPEISDSFQGRDVIRNFLCHKKVLIVLDDVSHRRQLDNLARNKEWFGAGSKIIITTRDIQLLTQYEQFEAYEVGRLSADESLKLFCQKAFKKDEPNRSYLDLSREVVEYASGLPLALEVLGSFLCRRKQSEWRDTLEKLRQNLHHDIFNQLRISYDGLEDEEYRRMFLDIACFYNGEAKSKVIGILKICGLHPIIGIQVLIEKSLLGIQLESSLDSREIAEDHHYMPDVLKMLRRDIFLPTDFYDTLLLDASKECLHMHDLLQEMGRSIVLQESPGDASRRSRLWVLEDIDLVLKGNRSLGKLRIIDLSDSDDLIETPDFSATPNLEELVLTHCSNLVRIHESVGQLKKLVKLRVGYCINLVTLPSYLETNNLEEFVLGGCINLQKLPEFGRNMANLYFLDVRSTRIKKIPLSIIHLINLRYLDVSDCNMLKSMPELPPNLIISGSYCPLLKLTTALVHLYDSHVFKVSYLSLPSFLIHFF | 753 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1100g00020 | 753 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 184 | 442 | IPR027417 | - | |
Pral1100g00020 | 753 | Gene3D | - | 347 | 432 | IPR042197 | - | |
Pral1100g00020 | 753 | Pfam | NB-ARC domain | 197 | 417 | IPR002182 | GO:0043531 | |
Pral1100g00020 | 753 | SMART | till_3 | 16 | 154 | IPR000157 | GO:0007165 | |
Pral1100g00020 | 753 | SUPERFAMILY | L domain-like | 572 | 715 | - | - | |
Pral1100g00020 | 753 | PRINTS | Disease resistance protein signature | 382 | 396 | - | - | |
Pral1100g00020 | 753 | PRINTS | Disease resistance protein signature | 214 | 229 | - | - | |
Pral1100g00020 | 753 | PRINTS | Disease resistance protein signature | 289 | 303 | - | - | |
Pral1100g00020 | 753 | PRINTS | Disease resistance protein signature | 570 | 586 | - | - | |
Pral1100g00020 | 753 | ProSiteProfiles | TIR domain profile. | 15 | 179 | IPR000157 | GO:0007165 | |
Pral1100g00020 | 753 | Gene3D | - | 180 | 342 | IPR027417 | - | |
Pral1100g00020 | 753 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 349 | 431 | - | - | |
Pral1100g00020 | 753 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 13 | 181 | - | - | |
Pral1100g00020 | 753 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 9 | 157 | IPR035897 | - | |
Pral1100g00020 | 753 | Gene3D | - | 14 | 179 | IPR035897 | - | |
Pral1100g00020 | 753 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 572 | 712 | IPR044974 | GO:0006952 | |
Pral1100g00020 | 753 | Pfam | TIR domain | 17 | 189 | IPR000157 | GO:0007165 | |
Pral1100g00020 | 753 | Gene3D | Ribonuclease Inhibitor | 535 | 749 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1100g00020 | Pral-Chr1100 | 519397 | 522512 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1100g00020 | 199 | 713 | WRKY Transcription Factor Family | AT5G45050 | 28.378 | 7.78e-48 | 181 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1100g00020 | - | - | pcin:129302222 | 763.837 |