Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1100g00020 ATGGCACTTACTAGTGCTCCGGGTTCTTCTACAATCTCACTCATGAGTTATCATGTTTTCTTAAGTTTTAGAGGAGAAGATACTCGAACAAATTTGACTGATCATTTATACTTTGCATTACTCCGAAAGGGAGTCGTAACATTTAGGGATGATGAAGAACTTGAAAGAGGACAAGTTATTTCTGAGAAACTCATTAAAGCTATTGGGCAATCTCTGTTTTCCGTTGTTGTCCTCTCTCAACATTATGCTTCTTCCTCGTGGTGTTTGGATGAATTGGAAAAGATTATGGAATCCAAACAAAACCATGGGCAAACAGTTTTTCCAGTTTTTTATGGTGTAGATCCATCTGATGTACGACGTCAGAAAAACAGCTTTGCCACAGCTTTTGAGAAACACACACGCGTCTTTTCAGAGGATAAAGTACGAAGATGGAGAGAAGCTTTAACCATGGTCGCTAATTTGTCTGGTTGGGATACCAGAAATAGACATGAAGGAGAAATTGTCGAAGACATTGCCAAGTTCATATGGAACAAATTATGTGATAAATTGCCATCAAGTTTTGAACATTTAGTTGGAGATGTGCAATCAAAGGCAGAGAGGATAATCTCCAGTTTAAAGATAGGATTGGATGATAAGTGCTTCATAGGGATATGGGGTATGGGTGGGATAGGTAAGACAACTCTTGCTCGAGTTGTTTATGATTCAATCCGAAAAAAGTTTGACACTCGTTGTTTTCTTGCCAATGTAAGGGAAGATTCCAAAAGGGTTGCCTTGGTTGGCTTACAAAAGAAACTTCTTTCTTGTCTTGGACTAGGAGAACCAGAAATAAGTGACTCCTTTCAGGGACGAGATGTCATAAGAAATTTCTTGTGCCATAAGAAGGTTCTCATTGTTCTTGATGATGTAAGCCATAGACGTCAGTTGGATAATTTGGCTAGAAATAAAGAGTGGTTTGGTGCAGGGAGCAAAATAATAATAACTACTCGAGATATACAATTATTGACACAGTATGAACAGTTTGAAGCATATGAAGTGGGGAGGTTAAGTGCAGATGAGTCCCTTAAACTCTTCTGTCAGAAAGCATTCAAAAAAGACGAGCCAAACCGAAGTTATTTGGATTTGTCCAGAGAAGTAGTTGAATATGCCAGTGGACTTCCTTTGGCACTTGAAGTCTTGGGATCTTTTCTTTGTAGGAGAAAGCAATCTGAATGGAGAGACACATTAGAAAAACTGAGGCAAAATTTACATCATGATATTTTTAATCAACTTCGCATCAGTTATGATGGATTAGAAGATGAAGAGTACAGGAGAATGTTTCTAGATATTGCATGTTTTTATAATGGGGAGGCCAAATCTAAGGTCATAGGTATATTGAAAATATGTGGCCTTCATCCAATAATTGGAATTCAAGTTCTTATAGAAAAATCTTTGCTAGGCATCCAGCTTGAATCTAGTTTAGATTCAAGGGAAATTGCAGAAGATCATCATTATATGCCAGATGTTCTTAAAATGTTGAGAAGGGACATTTTCTTGCCAACAGATTTCTATGACACGTTGCTTCTTGATGCTTCCAAAGAATGTCTACATATGCACGATTTGCTTCAAGAGATGGGAAGAAGCATTGTTTTGCAAGAATCTCCTGGTGATGCTAGTCGGCGCAGTAGATTGTGGGTTTTAGAGGACATTGATCTTGTGTTGAAAGGAAATAGGTCTTTGGGTAAGCTGAGGATCATTGATTTGAGTGATTCTGATGACCTAATAGAGACTCCAGATTTCTCTGCAACACCAAATCTGGAAGAGTTAGTCCTTACTCATTGCAGCAACCTAGTTCGGATTCATGAATCTGTTGGACAGTTAAAGAAGTTGGTTAAGCTACGTGTGGGATATTGCATAAATCTTGTAACTCTTCCAAGTTATTTGGAAACAAATAATCTAGAGGAGTTTGTTCTTGGTGGATGCATAAATCTTCAGAAACTTCCTGAATTTGGCAGAAATATGGCAAATCTATACTTCTTGGATGTGAGGAGCACTAGAATCAAGAAGATTCCTTTATCCATAATTCATTTAATAAATCTCAGATATTTAGATGTGAGTGATTGCAACATGCTCAAGTCAATGCCTGAGCTCCCTCCAAATTTGATCATATCTGGAAGCTATTGTCCTCTGTTGAAGCTTACGACAGCTCTCGTACACCTATACGACTCGCATGTCTTTAAGGTTTCATATCTATCTCTTCCTTCGTTTCTCATACATTTTTTTTAA 2262 0.3784 MALTSAPGSSTISLMSYHVFLSFRGEDTRTNLTDHLYFALLRKGVVTFRDDEELERGQVISEKLIKAIGQSLFSVVVLSQHYASSSWCLDELEKIMESKQNHGQTVFPVFYGVDPSDVRRQKNSFATAFEKHTRVFSEDKVRRWREALTMVANLSGWDTRNRHEGEIVEDIAKFIWNKLCDKLPSSFEHLVGDVQSKAERIISSLKIGLDDKCFIGIWGMGGIGKTTLARVVYDSIRKKFDTRCFLANVREDSKRVALVGLQKKLLSCLGLGEPEISDSFQGRDVIRNFLCHKKVLIVLDDVSHRRQLDNLARNKEWFGAGSKIIITTRDIQLLTQYEQFEAYEVGRLSADESLKLFCQKAFKKDEPNRSYLDLSREVVEYASGLPLALEVLGSFLCRRKQSEWRDTLEKLRQNLHHDIFNQLRISYDGLEDEEYRRMFLDIACFYNGEAKSKVIGILKICGLHPIIGIQVLIEKSLLGIQLESSLDSREIAEDHHYMPDVLKMLRRDIFLPTDFYDTLLLDASKECLHMHDLLQEMGRSIVLQESPGDASRRSRLWVLEDIDLVLKGNRSLGKLRIIDLSDSDDLIETPDFSATPNLEELVLTHCSNLVRIHESVGQLKKLVKLRVGYCINLVTLPSYLETNNLEEFVLGGCINLQKLPEFGRNMANLYFLDVRSTRIKKIPLSIIHLINLRYLDVSDCNMLKSMPELPPNLIISGSYCPLLKLTTALVHLYDSHVFKVSYLSLPSFLIHFF 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1100g00020 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 442 IPR027417 -
Pral1100g00020 753 Gene3D - 347 432 IPR042197 -
Pral1100g00020 753 Pfam NB-ARC domain 197 417 IPR002182 GO:0043531
Pral1100g00020 753 SMART till_3 16 154 IPR000157 GO:0007165
Pral1100g00020 753 SUPERFAMILY L domain-like 572 715 - -
Pral1100g00020 753 PRINTS Disease resistance protein signature 382 396 - -
Pral1100g00020 753 PRINTS Disease resistance protein signature 214 229 - -
Pral1100g00020 753 PRINTS Disease resistance protein signature 289 303 - -
Pral1100g00020 753 PRINTS Disease resistance protein signature 570 586 - -
Pral1100g00020 753 ProSiteProfiles TIR domain profile. 15 179 IPR000157 GO:0007165
Pral1100g00020 753 Gene3D - 180 342 IPR027417 -
Pral1100g00020 753 FunFam Disease resistance protein (TIR-NBS-LRR class) 349 431 - -
Pral1100g00020 753 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 181 - -
Pral1100g00020 753 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Pral1100g00020 753 Gene3D - 14 179 IPR035897 -
Pral1100g00020 753 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 572 712 IPR044974 GO:0006952
Pral1100g00020 753 Pfam TIR domain 17 189 IPR000157 GO:0007165
Pral1100g00020 753 Gene3D Ribonuclease Inhibitor 535 749 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1100g00020 Pral-Chr1100 519397 522512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1100g00020 199 713 WRKY Transcription Factor Family AT5G45050 28.378 7.78e-48 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1100g00020 - - pcin:129302222 763.837