Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1100g00018 ATGGCCGACTTTATTAATCCAGTCATCGACATCCTAACTCGTTTGTGTGGTTACTGTTCCAAATGGGCAGATTCAATAAACCAACTAGGAGACAACCTCATCTCTTTGAGAAATGCTTCAAATGAACTCGATGACATGTATGTTGATGTCAAGAGGAGGGTCGAATCGGCGGAGCAGGATCCAGATCCAGAGTTGACGGTTTTGGAGGTGGTAAGGGGTTGGATGGGCAGAGTTGAAGAGCTGCAAAAGGGGGTCCAGGCCATTCTGCAGCAAGGCGATCAAGAAATACAAGCGAAGTGTTTTGGGGGTCGCTGTCCCAAAAATTGTCGGGCTTGCTACAAGCTACACAAAGACGCTACCCAGAAGTTGAGTGATGTAAATGCTCTTATAAGCAATGGGCATTTTGATGTTGTAGCAGAAAAGTTTGCTTGTGATCAGTTTGAAGAACTTCCTGTGGATACGGCTGTGGGTGTAGAATCAACATTTGAGGAGCTACGTTCATGCTTTGAGAACAATCAGGTGCGTGTCATTGGTTTGTATGGGATAGGAGGGGTAGGCAAAACAACTCTGCTTAAGAAATTCAACAATGATTTCCTCTCAACAATGCCACAATATGTAGTCATCTGGGTTGAGGCATCTAAAGATGTAGATCCAGGAAAAATACAAGAAGATATTAGGAAGAAATTACGCATTGGAGATGATATTTGGAATAATAGGACAGTGAATGACAGAGCTCGTTTTTTATATAATATCTTAAAGAGTAAGAAATTTGCGTTGTTAGTAGATGACGTGTGGGAAAGGATTGACATGTTGAAATTAGGGGTTCCTTCTCCTAAAGATCATGAATGTAAGATAATATTCACAACTCGGTCACAAGAGATATGCGGCCAAATGGATGCACAGAAAAGCATAAAAGTAAATTGCCTCACGTTTGATAAAGCATTTGAGTTGTTCAAGGAGAAAATGGATGAAAATGCTCTTGAGAACCCTCATATATTGACTCTTGCAAAGCAAGTGGTGAAAGAGTGTCAAGGCCTACCACTCGCTCTTTGTACCGTTGGACGTGCCATGGCTAACAAGGTGACTCCCACTGAATGGAGCCGTGCTATAGAAATTTTGAGGAGTTATCCATCAAAAGTCCAAGGTATTGTTAATGATGTGTATTACTTGCTTGAATTTAGTTATGAGAGACTGCCGGATGATACTTACAAATCGTGTTTTCTGTATTGTGCCTTATTCCCTGAAGATTATAGCTTTAAAAAACAAGAGCTTATTTTGCTCTGGATAGCAGAAGGTTTTCTGGTTGAATTTGATTATGATATATATGAAGCACGTAAACAAGGGGAAGATATAATTTCCAGTCTAAAAGATGCTTGCTTATTGGAAAATGGTGTGGAAGAAGGTACATTTAAGATGCATGATGTCATAAGAGACATGGCTCTCTGGGTAGCTTGTGATCATGGGAAAAAGACAAAATTCTTTTCTGGAAATGTTTTTGGGACTAGTGGCCTTAAAGTATACAATCATGCAAAGTGGAAAGAGGTAGAAAAGCTGTCAATGTGGGGGTGGGGTGAAGCGAGTACAAACTTCTCACAAAAACCTCATTGTCCTAATCTCGTGACTCTGCTTATTAGGAATACTAGGATACAAGTCTTTCCAACTGAGGTATTTGTCCTTCCAAGCACTGTCAGAGTTCTAGACTTTTCTTTTGAACGTGGAATAAGAGATGTACCATCAGAAATTGGAGACTTTGTAAACCTTGAACACATGAACCTATCATATACTGGTATAAGAAAATTGCCAGAGGAGTCGAAGAATTTGAAGAAGCTGAGGTTCTTGTTGTTGGACGGACTAGGAGAGCTTGAATTCCCAGAAAAAGTTATATCTGGTTTGCTATCCCTTCAAGCTTTTAGCTCGACACGGTCAAAAGTTCGAGGGATTGATGAAAATGTGTTGTTGGATGAGCTAGAAGGCTTAGAGCATCTTCAAGATATGCGTTTATCTGTCATTAGCATATCCTCTATTGGAAAAATACTGATCTCCTCAAAATTGCAAAGGTGCATTTGTGGGTTAAACTTTGAAGGAGAAAGCTCACCACTCCATGACTTCTTCTCATCACTTGGAAAGATGGAGCATCTTGAAACATTACGAGTTTATTATTCTGACGTTGTGGATATTCCAAGGCGCTCATTTTGGGCACCTGATCATATAATCAACCTTCGAGAGTTGGTTCTCTATGGGTGTGGTAATAATATAGTTGACTTGAATTGGCTTATACATGCTCCAAACCTTGAAGTCCTTCAAATAAGAGATTGTGATTCATTGGTTGAAGTTGTGAGTGCAGATTTTGGGACTGCTGGCATTGAGAGAGTGAAAAGCAATCTATTTTGTAGTCTCACTTATCTTCATTTGGAATCTCTGAATAATTTAAGGAGCATTTGTAGAATACCATTACAGTTTCCTTGTTTGAAGGAGATTCGGGTAGCAAAGTGCCCCTATTTGAAGAAGCTCCCATTTAATTCTCAAAGTGCATTGAAAAGCCTACAACGCTTTACGGTATATCCTCATCAGTTGTTGGATCAATTGGAATGGGAAGACGAAGAAACCAAGCATCTTCTTTCATCAAAATTTGAAAGGTAA 2640 0.3977 MADFINPVIDILTRLCGYCSKWADSINQLGDNLISLRNASNELDDMYVDVKRRVESAEQDPDPELTVLEVVRGWMGRVEELQKGVQAILQQGDQEIQAKCFGGRCPKNCRACYKLHKDATQKLSDVNALISNGHFDVVAEKFACDQFEELPVDTAVGVESTFEELRSCFENNQVRVIGLYGIGGVGKTTLLKKFNNDFLSTMPQYVVIWVEASKDVDPGKIQEDIRKKLRIGDDIWNNRTVNDRARFLYNILKSKKFALLVDDVWERIDMLKLGVPSPKDHECKIIFTTRSQEICGQMDAQKSIKVNCLTFDKAFELFKEKMDENALENPHILTLAKQVVKECQGLPLALCTVGRAMANKVTPTEWSRAIEILRSYPSKVQGIVNDVYYLLEFSYERLPDDTYKSCFLYCALFPEDYSFKKQELILLWIAEGFLVEFDYDIYEARKQGEDIISSLKDACLLENGVEEGTFKMHDVIRDMALWVACDHGKKTKFFSGNVFGTSGLKVYNHAKWKEVEKLSMWGWGEASTNFSQKPHCPNLVTLLIRNTRIQVFPTEVFVLPSTVRVLDFSFERGIRDVPSEIGDFVNLEHMNLSYTGIRKLPEESKNLKKLRFLLLDGLGELEFPEKVISGLLSLQAFSSTRSKVRGIDENVLLDELEGLEHLQDMRLSVISISSIGKILISSKLQRCICGLNFEGESSPLHDFFSSLGKMEHLETLRVYYSDVVDIPRRSFWAPDHIINLRELVLYGCGNNIVDLNWLIHAPNLEVLQIRDCDSLVEVVSADFGTAGIERVKSNLFCSLTYLHLESLNNLRSICRIPLQFPCLKEIRVAKCPYLKKLPFNSQSALKSLQRFTVYPHQLLDQLEWEDEETKHLLSSKFER 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1100g00018 879 FunFam Probable disease resistance protein At1g63360 395 482 - -
Pral1100g00018 879 Gene3D Ribonuclease Inhibitor 508 864 IPR032675 -
Pral1100g00018 879 PRINTS Disease resistance protein signature 176 191 - -
Pral1100g00018 879 PRINTS Disease resistance protein signature 251 265 - -
Pral1100g00018 879 PRINTS Disease resistance protein signature 343 357 - -
Pral1100g00018 879 PRINTS Disease resistance protein signature 759 775 - -
Pral1100g00018 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 410 IPR027417 -
Pral1100g00018 879 Gene3D - 309 394 IPR042197 -
Pral1100g00018 879 FunFam Probable disease resistance protein At5g66910 308 394 - -
Pral1100g00018 879 FunFam Probable disease resistance protein At1g61300 138 303 - -
Pral1100g00018 879 Pfam NB-ARC domain 170 396 IPR002182 GO:0043531
Pral1100g00018 879 Coils Coil 40 60 - -
Pral1100g00018 879 Gene3D - 395 481 IPR036388 -
Pral1100g00018 879 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 848 - -
Pral1100g00018 879 Gene3D - 136 308 IPR027417 -
Pral1100g00018 879 SUPERFAMILY L domain-like 469 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1100g00018 Pral-Chr1100 438683 441322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1100g00018 174 492 WRKY Transcription Factor Family AT5G45050 22.619 8.68e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1100g00018 - K13459 pcin:129286803 1077.77