Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1100g00010 ATGGCCGACTTCATTACTCCAGTCATTGACATCCTAAGTCGTCTGTGTGGTTATTGCACCAAATGGGCAGATTCAATACGCAATCTTGGAGAAAATCTCATCTCTTTGAGAAATGCTTCAAATCAACTCAATGACGTGTATCTTGATGTCAAGATGAAGGTCGAAATGGCAGAGCAGGACCCAGATCCAAGGCTGAAGGTTTTGAATGAGGTAAGGGGTTGGATGGGCAGAGTAGAAGAGCTACAAAATGAAGTCCGACCCATTTTGCATCAAGGTGAAGGAGAAATACAAGCCAAGTGTTTCGGAGGTCGTTGTCCCAAGAATTGTCGGGCTAGCTACAAGCTAAGCAAAATGGTTGCCCAGAAGTTGAGTATCATTAATGATCTTACAAGCAAAGGCCATTTTGATGTTGTAGCAGAAAAGCTTGCCCGTGATACGTTCGATGAACTTCCTGTGGATAAGGCTGTGGGAGTAGAATCAACATTTGTGGAGCTATGTTCGTGCTTTGAGAACAACCATGAGCGCATCATTGGTTTGTATGGAATCGGAGGGGTAGGCAAAACGACTCTACTTAAGAAATTCAACAATGAATTCCTCTCAAAAACACCAGATTACACTGTCATCTGGGTTGTGGCATCTAAAGATGTAGATCTAGGAAAAATTCAAGAAGATATTAGGAAGAAATTGCGCGTCCAAGATGATATTTGGAATCATAAGACAGTGGATGACAGAGCTCTTTTGTTATACAATATCTTAAAGAACAGGAAATTTGTGTTGTTATTAGATGATGTGTGGCAAAGGATTGACTTGCTGAAATTAGGGGTTCCTTCCCCAAATAATCATGAATGTAAGGTAATATTTACCACTCGGTCAGAAGAGGTATGTGGTCGAATGGATGCACAGAGAAACATAAAAGTAAATTGCCTCACAGCAGATAAAGCATTCGACTTGTTCAAGGAGAAAGTGGGTGTTACTACTCTTGAAAAACCTCATATATTGCCTCTTGCAAAGCAAGTGGTGAAAGAGTGTCAAGGCTTGCCACTTGCTCTTTGTACTATTGGGCGTGCCATGGCTAACAAGGTAACTCCCGATGAATGGAGGCGTAGTATAGAAATTTTGAGGCATTATCCCTCAAAAGTCCAAGGTATCATTGAAGATGTCTATCACTTGCTTGAATTTAGTTATGATAGATTGCCGAATGATACCTACAGATCATGCTTTTTGTCTTGTGCCCTGTTTCGTGAGGACTATAATATTGAAAAACAAGAGCTTATTTTGCTCTGGATTGCTGAAGGCTTTTTGGATTATGATATACATGAAGCACGTAAGCAAGGAGAAGATATAATTTCAAGTCTAAAGTCCGCTTGCTTATTGGAAAATGGTGAGGAAGAAAATACAATTAAGATGCATGATGTGATCAGAGATATGGCTATCTGGCTAGCGTGTCATCATGGGAAAAAGGCAAGATTCATGATAAGAGATTGTTCCAAGACTAGTGACCTTGAAGCAAACAATCATGCAAAGTGGAAAGAGGTAGAAAAGCTATCAATGTGGGGCGGGGGTGAAGTGAGTACAAGCTTCGCACAAAAACCTCGCTGTCCTAATCTCATCACTTTGCTTATTAGGGATGATGGAATACGAGTCTTTCCAACTGAGGTATTTGTCCTTCCAAGCACTGTCAGAGTACTAGACTTGTCATCTAACGAAGGAATAACAAATCTACCATCAGAAATTGGGGACTTTGTGAGCCTTCAATACATGAACCTATCCCGTACTGGTATAAAAAAATTGCCGGAGCAGATGAAGAATTTGAAGAAGCTGAGGGTCTTGTTGCTGGACGAAATCCACGAGCTTGAATTCCAAGAGAAAGTTATATCTGGTTTGTTATCCCTTCAAGCTTTTTGCACGAGATCGTCAAAAATTCGAGGGATTGATAAAAATGTGTTGTTGAATGAGCTAGAAAGCTTAGATCATCTTCAAGATATACGCATTTTTATCCGTAACACATCCTCTGTTGAAAAAATACTGATCTCCTCAGAATTGCAAAGGTGCATATGTGAGCTATTTGTTATGAGAGTAGACTCGTCATTCCACGGCTTGTTCTCATCGCTTGGAAATATGAAGCATCTTGAAACATTACGAGTTTATGATTCTCACGCTATGGATATTCCGAGGGGCTCATTTTGGGGACATGATTATATAATCACCCTTCGCCAGTTGGTTCTTGATAGTTGTCAAAATATAGTTGACTTGAACTGGCTTGTACATGCTCCAAACCTTGAATTCCTCGAGTTAGCCGGTTGTAATTCATTGGTGGAAGTTATAAGTAGTGAAGATTTTGGCACTGAGATACAGAAAAGTAATCTATTTTGTAGTCTCACTTATCTTCGGTTGACTTATCTGTTGAGCTTAAGGAGCATTTGTAGAACAGCATTACAGTTTCCTTGTTTAAAGGAGATTGAAGTAATACAGTGCCCCTGTTTGAAGAAACTCCCATTTAATTCTAAAAGTGCATTGAATAATCTACAACGCTTTATTATAGGAGATCATGATGATTGGTTTTTGGATCAGTTGGAATGGGAAGACGGAGCCACCAAGCATCTTCTTTCTTCAAAATTTGAAAAAAGGTAA 2631 0.3976 MADFITPVIDILSRLCGYCTKWADSIRNLGENLISLRNASNQLNDVYLDVKMKVEMAEQDPDPRLKVLNEVRGWMGRVEELQNEVRPILHQGEGEIQAKCFGGRCPKNCRASYKLSKMVAQKLSIINDLTSKGHFDVVAEKLARDTFDELPVDKAVGVESTFVELCSCFENNHERIIGLYGIGGVGKTTLLKKFNNEFLSKTPDYTVIWVVASKDVDLGKIQEDIRKKLRVQDDIWNHKTVDDRALLLYNILKNRKFVLLLDDVWQRIDLLKLGVPSPNNHECKVIFTTRSEEVCGRMDAQRNIKVNCLTADKAFDLFKEKVGVTTLEKPHILPLAKQVVKECQGLPLALCTIGRAMANKVTPDEWRRSIEILRHYPSKVQGIIEDVYHLLEFSYDRLPNDTYRSCFLSCALFREDYNIEKQELILLWIAEGFLDYDIHEARKQGEDIISSLKSACLLENGEEENTIKMHDVIRDMAIWLACHHGKKARFMIRDCSKTSDLEANNHAKWKEVEKLSMWGGGEVSTSFAQKPRCPNLITLLIRDDGIRVFPTEVFVLPSTVRVLDLSSNEGITNLPSEIGDFVSLQYMNLSRTGIKKLPEQMKNLKKLRVLLLDEIHELEFQEKVISGLLSLQAFCTRSSKIRGIDKNVLLNELESLDHLQDIRIFIRNTSSVEKILISSELQRCICELFVMRVDSSFHGLFSSLGNMKHLETLRVYDSHAMDIPRGSFWGHDYIITLRQLVLDSCQNIVDLNWLVHAPNLEFLELAGCNSLVEVISSEDFGTEIQKSNLFCSLTYLRLTYLLSLRSICRTALQFPCLKEIEVIQCPCLKKLPFNSKSALNNLQRFIIGDHDDWFLDQLEWEDGATKHLLSSKFEKR 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1100g00010 876 Gene3D - 135 308 IPR027417 -
Pral1100g00010 876 Gene3D - 395 478 IPR036388 -
Pral1100g00010 876 FunFam Probable disease resistance protein At1g63360 395 479 - -
Pral1100g00010 876 FunFam Probable disease resistance protein At5g66910 308 394 - -
Pral1100g00010 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 410 IPR027417 -
Pral1100g00010 876 FunFam Probable disease resistance protein At1g61300 138 303 - -
Pral1100g00010 876 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 36 832 - -
Pral1100g00010 876 SUPERFAMILY L domain-like 468 848 - -
Pral1100g00010 876 Coils Coil 601 621 - -
Pral1100g00010 876 Gene3D Ribonuclease Inhibitor 486 846 IPR032675 -
Pral1100g00010 876 Gene3D - 309 394 IPR042197 -
Pral1100g00010 876 Pfam NB-ARC domain 173 396 IPR002182 GO:0043531
Pral1100g00010 876 PRINTS Disease resistance protein signature 755 771 - -
Pral1100g00010 876 PRINTS Disease resistance protein signature 343 357 - -
Pral1100g00010 876 PRINTS Disease resistance protein signature 176 191 - -
Pral1100g00010 876 PRINTS Disease resistance protein signature 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1100g00010 Pral-Chr1100 179599 182370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1100g00010 175 477 WRKY Transcription Factor Family AT5G45050 23.548 2.79e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1100g00010 - K13459 pcin:129286803 1081.63