Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1096g00007 ATGCCTCACGGAACCCTTGAAGTCCTTCTGGTTAGTGCCAAGAGTCTTGAGAATACCGATTTTCTCAACAACATGGATCCCTATGTGATCCTCACCTGTCGCACTCAGGAGCAGAAAAGCAGCGTAGCATCAGGTAAAGGATCTGATCCGGAGTGGAATGAAACTTTCGTTTTCAACTTGACCGGTGACGTTTCGGAACTCGTATTGAAGATATTGGACAGTGATGCTGGCACGGATGATGATTTCGTAGGAGAAGCAACCATCCCGCTAGATGCTTTGTTCACTGAAGGAAGCATCCCACCTACGGCGTACAACGTTGTCAAGGATGAGGAGTATCACGGGGAGATTAAACTCGGCCTCACTTTTACCCCTGAGGCGCGCAGCAGTGAATATGTGGAAGAGGAAAACTTAGGCGGATGGCAGCAATCTAGCAGAGACTTTTAA 444 0.482 MPHGTLEVLLVSAKSLENTDFLNNMDPYVILTCRTQEQKSSVASGKGSDPEWNETFVFNLTGDVSELVLKILDSDAGTDDDFVGEATIPLDALFTEGSIPPTAYNVVKDEEYHGEIKLGLTFTPEARSSEYVEEENLGGWQQSSRDF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1096g00007 147 SMART C2_3c 5 102 IPR000008 -
Pral1096g00007 147 Pfam C2 domain 4 96 IPR000008 -
Pral1096g00007 147 PANTHER C2 DOMAIN-CONTAINING 1 135 - -
Pral1096g00007 147 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
Pral1096g00007 147 Gene3D C2 domain 2 125 IPR035892 -
Pral1096g00007 147 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1096g00007 Pral-Chr1096 33349 35556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1096g00007 4 119 C2H2 Transcription Factor Family AT4G21160 28.448 6.40e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1096g00007 - - tcc:18606483 229.565