Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1096g00001 TCCAAAACCCCCAAAGAGAAACGCAGATGGAGCTTCGTCAAATCTTACAGAGAACACGATAACCTCCCTACCACCACCGCTGTTAAAACCGGCATTCATAATAATGATAATCATTCGATCACCGTGGCTGCAGCTCCTGCACTCAGACTTCGTAGCGGCGGCAGATGCGTCCAAGCCACGGCGCAAAGCACCGCTAACCGTGAAGAATGGGCAGCCGTTAAGATTCAAGCCGCTTTTCGTGGATGTTTGGCAAGGAGAGCCCTGCGAGCGTTAAAAGGATTGGTCAAGCTGCAGGCGCTGGTGAGGGGTCAGGTGGCGAGGAAGCGGACGGCTGAGCGGCTGCAAAAAATGCAATTACACTTGCGAGCTCAGACTCGAGTTCGGGCGGGGCGGCTTAGTTCATCTTTGATGGCCATGTCATCAAATGTCCACCTCCATGATCCGGCAACACCTGACAAAGTTGAAAACCCCATCAGATCCAAGAGCATGAAATATGATCAGTCGTCAATACTCAAGATCAGTGGCAATAAGGAGAAATGTTGGAAGACAACAGACAGTTGGGTAGATGAGAAATCATGGAATCGACAAAGATCGTCCGTAAGAATCTGTGTGAACGATGAAAGAAATGTAAGGATCCTGGAAATGGATTCTGAAAAAAGAAACTTGGCATCAAAACGCAGAGCCAGAAACCTCTTCCACTCCGCTAATCTAGCTTTAGTTTCTGATCCTTATAGTCAGAATTTGATCGCCACAAAGAACTCAACAATTCATCATTCCGGTCCAATCCATCGTGAAATTCACCAATCTTACAGTCCACCAGAAGGGCATGAAGTTGATGAGACCCCATTCTGCACAGCAAACAATAGTCCTCCTTTTTTTTCTGGGTCCTCTAGGGATGGTAGCTCTAAAAGAAGCCCTTTTACTCCTACTAAGAGTGATGGTTCAAGGAGTTATGTAAGTGCTTATTCTGACTGCCCTAATTATATGGCTTACACCGAATCTTCTAAGGCAAAGGTCAGATCTCTCAGTGCTCCAAAACAGAGGACAAGGTATGAGAGGTCTGGTTCGTCTAATAGGTACTCAATGAACGGATTTGGCGAGTCAAGATTGTCTGCACAAAGGGCATCTGCTTTGCATGCAAGCTTCACTAGCAAAGCCTATCCCGGTTCTGGTCGTTTGGACAAGTTTGGTTTGCCTATGGGTCATAGATACTGA 1215 0.4675 SKTPKEKRRWSFVKSYREHDNLPTTTAVKTGIHNNDNHSITVAAAPALRLRSGGRCVQATAQSTANREEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGQVARKRTAERLQKMQLHLRAQTRVRAGRLSSSLMAMSSNVHLHDPATPDKVENPIRSKSMKYDQSSILKISGNKEKCWKTTDSWVDEKSWNRQRSSVRICVNDERNVRILEMDSEKRNLASKRRARNLFHSANLALVSDPYSQNLIATKNSTIHHSGPIHREIHQSYSPPEGHEVDETPFCTANNSPPFFSGSSRDGSSKRSPFTPTKSDGSRSYVSAYSDCPNYMAYTESSKAKVRSLSAPKQRTRYERSGSSNRYSMNGFGESRLSAQRASALHASFTSKAYPGSGRLDKFGLPMGHRY 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1096g00001 404 MobiDBLite consensus disorder prediction 340 362 - -
Pral1096g00001 404 Pfam Protein of unknown function (DUF4005) 299 363 IPR025064 -
Pral1096g00001 404 Gene3D - 65 118 - -
Pral1096g00001 404 ProSiteProfiles IQ motif profile. 92 118 IPR000048 GO:0005515
Pral1096g00001 404 ProSiteProfiles IQ motif profile. 68 96 IPR000048 GO:0005515
Pral1096g00001 404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 111 IPR027417 -
Pral1096g00001 404 PANTHER IQ-DOMAIN 5-RELATED 4 363 - -
Pral1096g00001 404 SMART iq_5 67 89 IPR000048 GO:0005515
Pral1096g00001 404 SMART iq_5 90 111 IPR000048 GO:0005515
Pral1096g00001 404 MobiDBLite consensus disorder prediction 282 317 - -
Pral1096g00001 404 MobiDBLite consensus disorder prediction 265 317 - -
Pral1096g00001 404 Pfam IQ calmodulin-binding motif 95 109 IPR000048 GO:0005515
Pral1096g00001 404 Pfam IQ calmodulin-binding motif 70 89 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1096g00001 Pral-Chr1096 4161 7328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1096g00001 69 404 IQD Protein Family AT4G23060 39.773 1.32e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1096g00001 - - qsa:O6P43_024223 374.785