Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1090g00004 ATGGCGAGAGGATCATCTTCATCTCCAAAAGTAGCCACTGTGAGCCAAGTGTGCGAGACAGGTTGCAGCTCACGACTATACAGAATCTTGAATTTTCGGGAAGGTCAAGCCACGAAAAATTTGGTCTCTAATTCCAGACGCTCCAATATACATGCCATTGCTGCAGAACATGGAAACCCAGGAAGTAGGCCGGATGTTCTCACCATAGTTGACGAAAAGAACTCTCAAAATCACACTAAAGTAAGTTTTAAGAGAAAATATTATTTTGGTTGCAAGAGTATAAGCTGTGTGAAGAATGATCAGGTAGCAATAGTTCATAGGGGAAATGAAGCAACAAAAAAGGTTGTAGCTCGGAATTTCATCAACGGGAAATATCTGTGCAAAGATGGAGCAATCTCCCAACCTTATCAATTCTTAGATGCTTTACAGATTTTATACTCAAACAAGGAGCTCTTCCTAAGACTTGCTCAAGAGCAGAACTCTCTATCAGGAAAAGAACAGTACCAGGCAGGGCAAAAAATGTTGACCAGATCTTCCTTTGAATCCAGATGGATGAACTCTCAGAGAAGTCATGCAACTCAGTGTGAAGCTCCATATGCTGGTTGTCACTATCCCCTTCATTCTCATGGTACGCATAATTATAATGTGCCATCTGGGGAGCATTCATATTTTCAGTTTTCTCATGCAAAGAGAAAGCTAACTCATGCGCTGGGAGTAAAGAAAAAGGGACACAGGTTGGGTACTGCTAATAAAAGGACGCATAAATTTCCCTATAGTTGCCAAGGAATTGAAGCTGGTGGTGACGAAGCCGAGGGATTGGAGAGTGTTAGGAGGAAATCAGCTAGCGGTGTCCATTCTGCTTTTGCAAAAGTAGGGAAGCTATCACTTGATTCCAAGAAGAGAGAGAAGATGAAGATAAGAGCCTTTATGTTATGTCGAGGAAAGAATGATGCTTCAGTTCATGGGTGTTGTGGTAGGAACATAACACAAGGCTCAGTCAGCCCTTCACTGCAGAATATACACACCACGCATGTTGAAGCTACGAAAAATCTATCTGAGATATTAAATTGCAGAATTGAGGAGCAGCACAATAATGAGCCACCAGGGGACGTTGTGAAGACAGTTAAAGATGAGTTACATTGTTTCAGTAAAAATGTCGAAATGAATCCTCCTGACAATGGTTACGCATATAATGGGATTCCAACAGGTTCTGAGAAATTCATAAAATCTGGCCATGAGTTGCATTCGAAAGGAAGTAGACATATGGATGTGCCCTCTGACCAAGATAGCAAAGACATGGACAGTCCTACTCAGAGCTCTGACGTGGATAGTACAAGTGCAGGAAATGGATCTGATATGGATTCACCTAATGTGGCCGAGGATCCGAGCTCCTCACCAGAAGTTGCTTCATCAAGCTCTTCGTCATGTCAGACTGTAAAGGATGCTATGGATATAACAAACATGATCGATGATCACCTTAATGCTGACTCTGCTACTGGGCAAGTTGTAAGGGAGGAAGTCACCAATCCACCAACTGTGGCCTCCCAACCTGCCAGTGAATGA 1563 0.4267 MARGSSSSPKVATVSQVCETGCSSRLYRILNFREGQATKNLVSNSRRSNIHAIAAEHGNPGSRPDVLTIVDEKNSQNHTKVSFKRKYYFGCKSISCVKNDQVAIVHRGNEATKKVVARNFINGKYLCKDGAISQPYQFLDALQILYSNKELFLRLAQEQNSLSGKEQYQAGQKMLTRSSFESRWMNSQRSHATQCEAPYAGCHYPLHSHGTHNYNVPSGEHSYFQFSHAKRKLTHALGVKKKGHRLGTANKRTHKFPYSCQGIEAGGDEAEGLESVRRKSASGVHSAFAKVGKLSLDSKKREKMKIRAFMLCRGKNDASVHGCCGRNITQGSVSPSLQNIHTTHVEATKNLSEILNCRIEEQHNNEPPGDVVKTVKDELHCFSKNVEMNPPDNGYAYNGIPTGSEKFIKSGHELHSKGSRHMDVPSDQDSKDMDSPTQSSDVDSTSAGNGSDMDSPNVAEDPSSSPEVASSSSSSCQTVKDAMDITNMIDDHLNADSATGQVVREEVTNPPTVASQPASE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1090g00004 520 MobiDBLite consensus disorder prediction 437 482 - -
Pral1090g00004 520 MobiDBLite consensus disorder prediction 414 520 - -
Pral1090g00004 520 MobiDBLite consensus disorder prediction 501 520 - -
Pral1090g00004 520 MobiDBLite consensus disorder prediction 414 436 - -
Pral1090g00004 520 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 15 81 - -
Pral1090g00004 520 Pfam Protein of unknown function (DUF3741) 119 161 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1090g00004 Pral-Chr1090 8169 11515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1090g00004 110 163 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 40.741 9.46e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1090g00004 - - pcin:129321773 643.269