Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1090g00003 ATGGCGAGAGGATCATCTTCATCTCCAAAAGTAGCCACTGTGAGCCAAGTGTGCGAGACAGGTTGCAGCTCACGACTATACAGAATCTTGAATTTTCGGGAAGGTCAAGCCACGAAAAATTTGGTCTCTAATTCCAGACGCTCCAATATACATGCCATTGCTGCAGAACATGGAAACCCAGGAAGTAGGCCGGATGTTCTCACCATAGTTGACGAAAAGAACTCTCAAAATCACACTAAAGTAAGTTTTAAGAGAAAATATTATTTTGGTTGCAAGAGTATAAGCTGTGTGAAGAATGATCAGGTAGCAATAGTTCATAGGGGAAATGAAGCAACAAAAAAGGTTGTAGCTCGGAATTTCATCAACGGGAAATATCTGTGCAAAGATGGAGCAATCTCCCAACCTTATCAATTCTTAGATGCTTTACAGATTTTATACTCAAACAAGGAGCTCTTCCTAAGACTTGCTCAAGAGCAGAACTCTCTATCAGGAAAAGAACAGTACCAGGCAGGGCAAAAAATGTTGACCAGATCTTCCTTTGAATCCAGATGGATGAACTCTCAGAGAAGTCATGCAACTCAGTGTGAAGCTCCATATGCTGGTTGTCACTATCCCCTTCATTCTCATGGTACGCATAATTATAATGTGCCATCTGGGGAGCATTCATATTTTCAGTTTTCTCATGCAAAGAGAAAGCTAACTCATGCGCTGGGAGTAAAGAAAAAGGGACACAGGTTGGGTACTGCTAATAAAAGGACGCATAAATTTCCCTATAGTTGCCAAGGAATTGAAGCTGGTGGTGACGAAGCCGAGGGATTGGAGAGTGTTAGGAGGAAATCAGCTAGCGGTGTCCATTCTGCTTTTGCAAAAGTAGGGAAGCTATCACTTGATTCCAAGAAGAGAGAGAAGATGAAGATAAGAGCCTTTATGTTATGTCGAGGAAAGAATGATGCTTCAGTTCATGGGTGTTGTGGTAGGAACATAACACAAGGCTCAGTCAGCCCTTCACTGCAGAATATACACACCACGCATGTTGAAGCTACGAAAAATCTATCTGAGATATTAAATTGCAGAATTGAGGAGCAGCACAATAATGAGCCACCAGGGGACGTTGTGAAGACAGTTAAAGATGAGTTACATTGTTTCAGTAAAAATGTCGAAATGAATCCTCCTGACAATGGTTACGCATATAATGGGATTCCAACAGGTTCTGAGAAATTCATAAAATCTGGCCATGAGTTGCATTCGAAAGGAAGTAGACATATGGATGTGCCCTCTGACCAAGATAGCAAAGACATGGACAGTCCTACTCAGAGCTCTGACGTGGATAGTACAAGTGCAGGAAATGGATCTGATATGGATTCACCTAATGTGGCCGAGGATCCGAGCTCCTCACCAGAAGTTGCTTCATCAAGCTCTTCGTCATGTCAGACTGTAAAGGATGCTATGGATATAACAAACATGATCGATGATCACCTTAATGCTGACTCTGCTACTGGGCAAGTTGTAAGGGAGGAAGTCACCAATCCACCAACTGTGGCCTCCCAACCTGTTGAGTTGCCAATTCAGCCAGTGAATGATAATTCTGGAGATCACCACTCTGCTGATCTTCCAAGATGCTCTTCGGACCTAGCGAATAATCTAATTACCTCGATAGAGTCAGATTGCGACAGAGAAATTTTGCAGGCGTTGAGCCTGAAATGGGATGAACTGGTGATGAACTGCGAGTTACCAGACCAACTAATGCATCCATCCCCCTTGGAGGAGCTAAAAGGGTTTATGCACAAACTCTCTGGCAGTGCAATCTTATTTGACTATGTCATGGAAGTCTTCATGGATACATACCAGCAATTATGTAGATTCCCACGTCATATTTCAATTGGGAAACCAAATGTCCAATCATATGTCTTGAAGAGAATGATGGTTGATGAAGTTAAAGAATTCATCGACTTGCATCATCACCAACGCCATCAACCACCAAGAACGCTAGAACAGATTCTCGAAAAGGACTTGGCCAGACGGCGATCATGGCTAAATGTTCAAGTTGATATTGATGATACTGTGACAGAAGTGCAGGAAGATGTTCTCCAAGAACTGATATTGGAAATCATATCGGGGATGGATACCACAGAAGTGTGA 2139 0.4259 MARGSSSSPKVATVSQVCETGCSSRLYRILNFREGQATKNLVSNSRRSNIHAIAAEHGNPGSRPDVLTIVDEKNSQNHTKVSFKRKYYFGCKSISCVKNDQVAIVHRGNEATKKVVARNFINGKYLCKDGAISQPYQFLDALQILYSNKELFLRLAQEQNSLSGKEQYQAGQKMLTRSSFESRWMNSQRSHATQCEAPYAGCHYPLHSHGTHNYNVPSGEHSYFQFSHAKRKLTHALGVKKKGHRLGTANKRTHKFPYSCQGIEAGGDEAEGLESVRRKSASGVHSAFAKVGKLSLDSKKREKMKIRAFMLCRGKNDASVHGCCGRNITQGSVSPSLQNIHTTHVEATKNLSEILNCRIEEQHNNEPPGDVVKTVKDELHCFSKNVEMNPPDNGYAYNGIPTGSEKFIKSGHELHSKGSRHMDVPSDQDSKDMDSPTQSSDVDSTSAGNGSDMDSPNVAEDPSSSPEVASSSSSSCQTVKDAMDITNMIDDHLNADSATGQVVREEVTNPPTVASQPVELPIQPVNDNSGDHHSADLPRCSSDLANNLITSIESDCDREILQALSLKWDELVMNCELPDQLMHPSPLEELKGFMHKLSGSAILFDYVMEVFMDTYQQLCRFPRHISIGKPNVQSYVLKRMMVDEVKEFIDLHHHQRHQPPRTLEQILEKDLARRRSWLNVQVDIDDTVTEVQEDVLQELILEIISGMDTTEV 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1090g00003 712 Pfam Domain of unknown function (DUF4378) 558 702 IPR025486 -
Pral1090g00003 712 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 15 81 - -
Pral1090g00003 712 MobiDBLite consensus disorder prediction 414 478 - -
Pral1090g00003 712 MobiDBLite consensus disorder prediction 437 478 - -
Pral1090g00003 712 MobiDBLite consensus disorder prediction 414 436 - -
Pral1090g00003 712 Pfam Protein of unknown function (DUF3741) 119 161 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1090g00003 Pral-Chr1090 7317 11515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1090g00003 558 685 TRM (TON1 Recruiting Motif) Superfamily AT1G01695 29.771 1.65e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1090g00003 - - pcin:129321773 909.827