Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1090g00002 ATGGCGAGAGGATCATCTTCATCTCCAAAAGTAGCCACTGTGAGCCAAGTGTGCGAGACAGGTTGCAGCTCACGACTATACAGAATCTTGAATTTTCGGGAAGGTCAAGCCACGAAAAATTTGGTCTCTAATTCCAGACGCTCCAATATACATGCCATTGAACATGGAAACCCAGGAAGTAGGCCGGATGTTCTCACCATAGTTGACGAAAAGAACTCTCAAAATCACACTAAAGTAAGTTTTAAGAGAAAATATTATTTTGGTTGCAAGAGTATAAGCTGTGTGAAGAATGATCAGGTAGCAATAGTTCATAGGGGAAATGAAGCAACAAAAAAGGTTGTAGCTCGGAATTTCATCAACGGGAAATATCTGTGCAAAGATGGAGCAATCTCCCAACCTTATCAATTCTTAGATGCTTTACAGATTTTATACTCAAACAAGGAGCTCTTCCTAAGACTTGCTCAAGAGCAGAACTCTCTATCAGGAAAAGAACAGTACCAGGCAGGGCAAAAAATGTTGACCAGATCTTCCTTTGAATCCAGATGGATGAACTCTCAGAGAAGTCATGCAACTCAGTGTGAAGCTCCATATGCTGGTTGTCACTATCCCCTTCATTCTCATGGTACGCATAATTATAATGTGCCATCTGGGGAGCATTCATATTTTCAGTTTTCTCATGCAAAGAGAAAGCTAACTCATGCGCTGGGAGTAAAGAAAAAGGGACACAGGTTGGGTACTGCTAATAAAAGGACGCATAAATTTCCCTATAGTTGCCAAGGAATTGAAGCTGGTGGTGACGAAGCCGAGGGATTGGAGAGTGTTAGGAGGAAATCAGCTAGCGGTGTCCATTCTGCTTTTGCAAAAGTAGGGAAGCTATCACTTGATTCCAAGAAGAGAGAGAAGATGAAGATAAGAGCCTTTATGTTATGTCGAGGAAAGAATGATGCTTCAGTTCATGGGTGTTGTGGTAGGAACATAACACAAGGCTCAGTCAGCCCTTCACTGCAGAATATACACACCACGCATGTTGAAGCTACGAAAAATCTATCTGAGATATTAAATTGCAGAATTGAGGAGCAGCACAATAATGAGCCACCAGGGGACGTTGTGAAGACAGTTAAAGATGAGTTACATTGTTTCAGTAAAAATGTCGAAATGAATCCTCCTGACAATGGTTACGCATATAATGGGATTCCAACAGGTTCTGAGAAATTCATAAAATCTGGCCATGAGTTGCATTCGAAAGGAAGTAGACATATGGATGTGCCCTCTGACCAAGATAGCAAAGACATGGACAGTCCTACTCAGAGCTCTGACGTGGATAGTACAAGTGCAGGAAATGGATCTGATATGGATTCACCTAATGTGGCCGAGGATCCGAGCTCCTCACCAGAAGTTGCTTCATCAAGCTCTTCGTCATGTCAGACTGTAAAGGATGCTATGGATATAACAAACATGATCGATGATCACCTTAATGCTGACTCTGCTACTGGGCAAGTTGTAAGGGAGGAAGTCACCAATCCACCAACTGTGGCCTCCCAACCTGTTGAGTTGCCAATTCAGCCAGTGAATGATAATTCTGGAGATCACCACTCTGCTGATCTTCCAAGATGCTCTTCGGACCTAGCGAATAATCTAATTACCTCGATAGAGTCAGATTGCGACAGAGAAATTTTGCAGGCGTTGAGCCTGAAATGGGATGAACTGGTGATGAACTGCGAGTTACCAGACCAACTAATGCATCCATCCCCCTTGGAGGAGCTAAAAGGGTTTATGCACAAACTCTCTGGCAGTGCAATCTTATTTGACTATGTCATGGAAGTCTTCATGGATACATACCAGCAATTATGTAGATTCCCACGTCATATTTCAATTGGGAAACCAAATGTCCAATCATATGTCTTGAAGAGAATGATGGTTGATGAAGTTAAAGAATTCATCGACTTGCATCATCACCAACGCCATCAACCACCAAGAACGCTAGAACAGATTCTCGAAAAGGACTTGGCCAGACGGCGATCATGGCTAAATGTTCAAGTTGATATTGATGATACTGTGACAGAAGTGCAGGAAGATGTTCTCCAAGAACTGATATTGGAAATCATATCGGGGATGGATACCACAGAAGTGTGA 2133 0.4252 MARGSSSSPKVATVSQVCETGCSSRLYRILNFREGQATKNLVSNSRRSNIHAIEHGNPGSRPDVLTIVDEKNSQNHTKVSFKRKYYFGCKSISCVKNDQVAIVHRGNEATKKVVARNFINGKYLCKDGAISQPYQFLDALQILYSNKELFLRLAQEQNSLSGKEQYQAGQKMLTRSSFESRWMNSQRSHATQCEAPYAGCHYPLHSHGTHNYNVPSGEHSYFQFSHAKRKLTHALGVKKKGHRLGTANKRTHKFPYSCQGIEAGGDEAEGLESVRRKSASGVHSAFAKVGKLSLDSKKREKMKIRAFMLCRGKNDASVHGCCGRNITQGSVSPSLQNIHTTHVEATKNLSEILNCRIEEQHNNEPPGDVVKTVKDELHCFSKNVEMNPPDNGYAYNGIPTGSEKFIKSGHELHSKGSRHMDVPSDQDSKDMDSPTQSSDVDSTSAGNGSDMDSPNVAEDPSSSPEVASSSSSSCQTVKDAMDITNMIDDHLNADSATGQVVREEVTNPPTVASQPVELPIQPVNDNSGDHHSADLPRCSSDLANNLITSIESDCDREILQALSLKWDELVMNCELPDQLMHPSPLEELKGFMHKLSGSAILFDYVMEVFMDTYQQLCRFPRHISIGKPNVQSYVLKRMMVDEVKEFIDLHHHQRHQPPRTLEQILEKDLARRRSWLNVQVDIDDTVTEVQEDVLQELILEIISGMDTTEV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1090g00002 710 Pfam Domain of unknown function (DUF4378) 556 700 IPR025486 -
Pral1090g00002 710 MobiDBLite consensus disorder prediction 412 476 - -
Pral1090g00002 710 Pfam Protein of unknown function (DUF3741) 117 159 IPR022212 -
Pral1090g00002 710 MobiDBLite consensus disorder prediction 412 434 - -
Pral1090g00002 710 MobiDBLite consensus disorder prediction 435 476 - -
Pral1090g00002 710 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 15 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1090g00002 Pral-Chr1090 7317 11515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1090g00002 556 683 TRM (TON1 Recruiting Motif) Superfamily AT1G01695 29.771 1.65e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1090g00002 - - pcin:129321773 901.738