Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1089g00004 ATGAAGCTCTCCTGTGAGGCTATCTTCGGTGGACTCACTCCTAAAGTTACTGCTTCGTTCTCCTACAGGGACTGCGTTCCTTTCCAAAAGCATCTTCTCAATTTGGAAACCTTTTCTTCTGTCTCTTTCCGCCATAGAAAATGGTTTGTGCTCATTTCACAGCCCAGCTTGGTGAAGAAGACGAAAGACAATTTTGGCAGAACTGGTTGTTCCACTTCTAGCCAATGCAATGCTTCTGTAGCTTTTGAGGGTGATTTCGTGGTGGTCAATTTTTACCATTTCGTGTTTATCGATGACCCGGAAGCAGAAGTCGCCAAGCACCTGGCGTTCATGGAGGGTCTTGACATAAATGGCAGAATTTACATAAATGAGCAAGGTATAAATGCGCAGTATAGTGGACCATCAAAGAATGCTCTGGCATATGTTGAATGGTTAAGGCAAGATGACAGATTTTCTGATATCCTGGTTCAGATTTCTCCATCACTAAAAGGGCATGCCTTCCCGAGATTGAAGTTGCGGTATAAGCCCTCACTTGTACAGTTGGAAGGTGGCATATCACTTCTTCCTCTTCTTGATTCTTCAATGCGAGCAACACCTTTAGCCCCATCAGAATGGAGAAATAGATTGGAAGCAATGAATAGGACTGGTCTTGCTTCAAAAGAGTGTCCTGACACCAATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGTGCTGTGCGCCCTAATGTAGACTGCTTTAGAAGCACTTCATTTGGCTGGTCCCAGGAAGAGGTGGCTGCCTCAGATCCTTTAGCAAATGTAGATAAAGAAAAAACGAATATATTGATGTACTGCACTGGAGGGATTCGTTGTGATGTATATTCCACAATACTGAGAAAGAAGGGCTTTCGGAATCTGTACACCTTGCAGGGAGGTGTTTCTAACTATCTAAAGAATGAAGGTCCTACGGAATGGGTAGGAAATCTATTTGTGTTCGACTCTCGTCTGTCTCTGCCTCCTTCTTCATACCATCCTGGAGCCACAACTGAAACAGGCAGCACTCAAGTCTCTGCAAATGATCAGTTTGCGAAATGCTACATATGTGGTTCTCAAGTCAGTGAATTGAGGCATAGGAACTGTGCAAATCTTGACTGCAATTTGCTTTTCCTATGCTGCAGAAAATGTGTAAAAGATGCAAGGGGATGCTGTTGTTGGAGTTGCACAACTGCTCCTAGACTTAGGCCTGTCTTAGATGGAGATCAGAGATACCAAAAATGGCACATCTATCGCGATATTGATGAGCAGAGCACCGTAACAACTTGA 1326 0.4351 MKLSCEAIFGGLTPKVTASFSYRDCVPFQKHLLNLETFSSVSFRHRKWFVLISQPSLVKKTKDNFGRTGCSTSSQCNASVAFEGDFVVVNFYHFVFIDDPEAEVAKHLAFMEGLDINGRIYINEQGINAQYSGPSKNALAYVEWLRQDDRFSDILVQISPSLKGHAFPRLKLRYKPSLVQLEGGISLLPLLDSSMRATPLAPSEWRNRLEAMNRTGLASKECPDTNYILLDVRNGYEWDIGHFRGAVRPNVDCFRSTSFGWSQEEVAASDPLANVDKEKTNILMYCTGGIRCDVYSTILRKKGFRNLYTLQGGVSNYLKNEGPTEWVGNLFVFDSRLSLPPSSYHPGATTETGSTQVSANDQFAKCYICGSQVSELRHRNCANLDCNLLFLCCRKCVKDARGCCCWSCTTAPRLRPVLDGDQRYQKWHIYRDIDEQSTVTT 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1089g00004 441 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 83 423 IPR020936 -
Pral1089g00004 441 Gene3D - 191 351 IPR036873 -
Pral1089g00004 441 Gene3D - 75 179 - -
Pral1089g00004 441 SMART rhod_4 206 323 IPR001763 -
Pral1089g00004 441 Pfam UPF0176 acylphosphatase like domain 87 176 IPR040503 -
Pral1089g00004 441 Pfam Rhodanese-like domain 225 318 IPR001763 -
Pral1089g00004 441 ProSiteProfiles Rhodanese domain profile. 223 326 IPR001763 -
Pral1089g00004 441 Pfam Rhodanase C-terminal 328 409 IPR022111 -
Pral1089g00004 441 CDD RHOD_YceA 200 319 - -
Pral1089g00004 441 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 225 339 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1089g00004 Pral-Chr1089 25874 29862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1089g00004 85 438 Sulfurtransferasese or Rhodanese AT1G17850 67.582 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1089g00004 - - gmx:100814358 599.742