Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1082g00002 ATGGCTGCAAAACTCCTGCACTCTTTAGCAGATGACAACCCTGATTTACAGAAGCAGATAGGATGCATGTCCGGGATTTTGCAACTTTTTGATCGGCATCATATTCTTACTGCCCGACAGATTAACCAGAAGAGGCTTCCTCCTGCTAATCGTCCAAGTGGAAACTCTCACTTTGCTAACGGCATCCTGGAAAAAGATTCTAGTAGTGCAAGGCAGCAGCAAATAACATCTGATGTGAGCCCAAACAAGGGCTTTGGTGAGAAACAAAGGATATCCACAGAGTCATCAAGAGTCTCTTTCTCGTCTTCATGTTCATCATCCCTGTCCTCTCTGGATTGCAGAGCTCAAATGGAGGGTTCCTTTGATCGCATTATTTATCCTGAAACTCCTTCAAGGGAACCAGTTATGAACCAAACAACTGTCTCTCCCCATTTAGGAATGCAATCCCTTGACCTGAGGGATGTGGTGAAGGATTCTATGTATAGGGAGGCCAGAGGACTACCGATGAAGAAGGCTACTGCTGAAGAAGAAGCTGTCTTTCATGCTGTGAAGCACAGGGACTCCCCGAGACCACTTCACCTGTCCAAATCTGCTGATGGATCTTGTGGAGTTGGAATTGATGGGAAGCAAAGTGTGCCTGTTGATGTAAAAGAGTCTCTCAGAGTTCTTGCTAAACTTAGAGAAGCACCATGGTATTATGGTGAAGCCAGAGAGATTCCAAGATCATCAAGTGAAGTAAAAGATGGACACTGGCATTTGATCTCAAGGGATGCTCCTCGGTTTTCTTATGATGGAAGAGAAATAAGTCGTCTATCTTTTGAATCAAGGGATACGATCAAAGGCCCACCAAAGCTAAAAGAGCTGCCTAGACTTTCACTGGACAGTAGGGAAGGCTCATGGTGCACTTACAGTGCTGATTCAAAACCCAATCTCCTATCAAGGAGCCTTGGAAGTGGCAACTCCACCTCGGATGATAAAATGGGTAGTTTACCACAGTCAACCCAGAGGCGACCTCCTAGTGTTGTAGCAAAATTGATGGGCTTAGAAGCATTGCCTGATTCCTATATGGCTGCTGATACTCCATTGAATTTGGGCGGAAATTTCTCAGCTCAACATGATACTCAGTTTCCAAAATCATCAAAAAATGGACTGATCAAGCCTCTGAAAGTTTTTAATTCCCCAAGAAGCTCATTGAAAGACCCAACCTCACCACGACGAAAGAACCCTGATTTAGTTATGAAACCTATTTCAAGTTCGAGATTTCCAATTGAACCGGCACCTTGGAAGCAGCAGGATGGAAATCAGAGCTCTCAGAAATCAAGTTTGAAGGCCATGAAAGCTCCAACAAGAACACCAGATTCATTTCCTTCAGTTTATAGTGAGATTGAGAAGAGATTGAAGGATCTTGAGTTCAAACAATCTGGAAGGGACCTCCGAGCACTCAAACAGATACTGGAAGCAATGCAAGCAAAGGGATTGTTAGAGACCAGAGAAGAAGAACAAGCTGTGGATGATGAAAGTCAAAGAGACAATGGAACAAATACTGTGAGTCTGAGTCAAAACTCTAGATCAGTAAGGCAACAAAGCCCACATAGCAATAATTTTCTGTCTTCCTCAAGGAGGGTAGCAGACTCAAGGGCTTGTGAGTCTCCAATTGTGGTCATGAAACCAGCAAGGCTTGTTGATAAAACTGGAATTTCTGCTTCCTCAGTAATTCCTGTTGGCGGACTTTCTAGTTTCCATAAACTTGACAGTGTTGCAAATGAAGATAAGAAAAGAATTTCAGCTTCCAGTCGAATATCAAAAGATCACTCTCCTAAAAACAACCGCAGGGATACTACTGCCAGTTCCAATGATAGGAAAAATGGTAGCGTCAACACTATAAAATCTGCACAATCTCAATCTAGGTCTCAACAAATTTCAAAAGAAAATAGCTTAAGCTCAATAAAGAATTCAGGATCTGTGAGTCCAAGAATGCAACAGAAGAAGCTAGAGTTTGAGAGGCGATCTTGTCCACAAACTCCACCATCAGATTCAAATAAAGCCAGAAGGAAATACAGTAAACAAGCCACAGATTCAGGTTCGCCAGGTGGAAAACTGAGACCAAAATCCCCTTGCTTACAGCAGAGTGATAACCCACTGAGTCTGATAAGAAATGAAACAAGAACATCAAGTTGCCAAAAGGATGAAATATTTGTGGAATCTGATAGTATCACTGTCTCAGACTCAAATATGGATATGGAAGTCAGCAGCAGTTTACAATCTCCTCAAACTAATGATAGCCGGTGCCCCTCCATGAAAACTGTGAAGCAGCCAATTTCTGGATCAACGCAGAAGAAATCAATTCCGAGGTTGCACGAGGATGAGTCAGTTGCTGATATTGCAATAAATTCCCAAGAACATCCTAGTCCTGTCTCAGTCCTCGATGGCTCTGTGTACAGAGATGATGAGCCTTCTCCTGTAAGGCAGATTGCTGATACTCCCAAAGCTGATGATGCCCAAGAGTGTGAAGGAAATGAGAATGAAGATTGGTGGAACCCTGCGGATAAATTAGTTTACAGTGCAGGATCTGGAGAGATCAATCGCAAGAAACTGCAGAGCATAGATCATCTTGTTCAGAAGCTTAGGCGGGTGAATTCCAGTCATGATGAATCTAGAAATGATTACATTGCTTCCCTCTGTGAAAATACAAATGCTGACCAAAGATACATATCTGAAATATTATTAGCTTCAGGCCTCCTACTGAGAGATCTGAGCTCTGAGCTGCTGACATTTCAACTTCATCCTTCAGGCCATCCCATTAACCCTGAGTTATTTTTCGTGTTAGAGCAAACCAAGGCAAGTAGTTTCATTCCGAAAGAAGAATGTGGTCCAGGAAAAGTTGCTTGTTCAAAGCTGAATGCAGAGAAATTTCACAGGAAACTCATATTTGATGCTGTGAATGAGATTCTTGGCGTGAAGTTAGCTTTAGTTAGCTCTTCTCCTGAACCTTGGGTGAAGCCTAGCAGGCTTACCAAGAAAAGCCTCGGTGCACAAAAGCTTCTTAAAGAACTGTGCTTTGAGATAGAAAAAATCCAATTCAAGAAGCCTGAAAGCAGTCAAGAACATGAAGACGGTCTCGGAAGGATACTCTCAGAAGATGTTATGCATGGCTCAGAGAGTTGGATAGAT 3171 0.4273 MAAKLLHSLADDNPDLQKQIGCMSGILQLFDRHHILTARQINQKRLPPANRPSGNSHFANGILEKDSSSARQQQITSDVSPNKGFGEKQRISTESSRVSFSSSCSSSLSSLDCRAQMEGSFDRIIYPETPSREPVMNQTTVSPHLGMQSLDLRDVVKDSMYREARGLPMKKATAEEEAVFHAVKHRDSPRPLHLSKSADGSCGVGIDGKQSVPVDVKESLRVLAKLREAPWYYGEAREIPRSSSEVKDGHWHLISRDAPRFSYDGREISRLSFESRDTIKGPPKLKELPRLSLDSREGSWCTYSADSKPNLLSRSLGSGNSTSDDKMGSLPQSTQRRPPSVVAKLMGLEALPDSYMAADTPLNLGGNFSAQHDTQFPKSSKNGLIKPLKVFNSPRSSLKDPTSPRRKNPDLVMKPISSSRFPIEPAPWKQQDGNQSSQKSSLKAMKAPTRTPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQAKGLLETREEEQAVDDESQRDNGTNTVSLSQNSRSVRQQSPHSNNFLSSSRRVADSRACESPIVVMKPARLVDKTGISASSVIPVGGLSSFHKLDSVANEDKKRISASSRISKDHSPKNNRRDTTASSNDRKNGSVNTIKSAQSQSRSQQISKENSLSSIKNSGSVSPRMQQKKLEFERRSCPQTPPSDSNKARRKYSKQATDSGSPGGKLRPKSPCLQQSDNPLSLIRNETRTSSCQKDEIFVESDSITVSDSNMDMEVSSSLQSPQTNDSRCPSMKTVKQPISGSTQKKSIPRLHEDESVADIAINSQEHPSPVSVLDGSVYRDDEPSPVRQIADTPKADDAQECEGNENEDWWNPADKLVYSAGSGEINRKKLQSIDHLVQKLRRVNSSHDESRNDYIASLCENTNADQRYISEILLASGLLLRDLSSELLTFQLHPSGHPINPELFFVLEQTKASSFIPKEECGPGKVACSKLNAEKFHRKLIFDAVNEILGVKLALVSSSPEPWVKPSRLTKKSLGAQKLLKELCFEIEKIQFKKPESSQEHEDGLGRILSEDVMHGSESWID 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 496 542 - -
Pral1082g00002 1057 Pfam Domain of unknown function (DUF4378) 901 1057 IPR025486 -
Pral1082g00002 1057 Pfam DUF761-associated sequence motif 333 355 IPR032795 -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 815 835 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 588 725 - -
Pral1082g00002 1057 PANTHER LONGIFOLIA PROTEIN 1 1057 IPR033334 GO:0051513
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 801 841 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 588 617 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 311 339 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 508 542 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 43 92 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 618 659 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 429 447 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 750 780 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 750 785 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 705 722 - -
Pral1082g00002 1057 MobiDBLite consensus disorder prediction 369 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1082g00002 Pral-Chr1082 18593 24793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1082g00002 144 1057 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.928 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1082g00002 - - gmx:100787391 1313.52